RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 YBX1P67809 324 aaKnown RBP11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 CCL8P80075 99 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 JOSD1Q15040 202 aaPredicted RBP11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 DEFB121Q5J5C9 76 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 TMEM92Q6UXU6 159 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 OR4P4Q8NGL7 312 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 OR10D4PQ8NGN7 298 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 POM121Q96HA1 1249 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 TMEM204Q9BSN7 226 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 LYRM2Q9NU23 88 aaPredicted RBP11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 OR5B21A6NL26 309 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 BTG1P62324 171 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 FAM219AQ8IW50 185 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 OR10G4Q8NGN3 311 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 OR10G9Q8NGN4 311 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 OR10G7Q8NGN6 311 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 SPSB1Q96BD6 273 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 BEX4Q9NWD9 120 aaPredicted RBP11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 OR4B1Q8NGF8 309 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 AURKAIP1Q9NWT8 199 aaPredicted RBP11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 IGHV3-72A0A0B4J1Y9 119 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 GABRA1P14867 456 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 LY6EQ16553 131 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 WDR38Q5JTN6 314 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 GVQW1Q8N7I0 195 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 DUX5Q96PT3 197 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 LILRA5A6NI73 299 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 TMEM241Q24JQ0 296 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 GAB4Q2WGN9 574 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 OR4S2Q8NH73 311 aa11.7□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 ANKRD36A6QL64 1941 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 RPS4Y1P22090 263 aaKnown RBP11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 RPL29P47914 159 aaKnown RBP11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 NMUP48645 174 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 EVX1P49640 407 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 FUT7Q11130 342 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 LRRC75AQ8NAA5 344 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 PSMG3Q9BT73 122 aaPredicted RBP11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 TRAV21A0A0B4J279 112 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 MC5RP33032 325 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 C10orf126Q8N4M7 172 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 RHBDD2Q6NTF9 364 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 SH2D5Q6ZV89 423 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 CALHM1Q8IU99 346 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 GPR27Q9NS67 375 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 IGHV3OR16-10A0A075B7F0 116 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 P01737 135 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 C1QBP02746 253 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 NXPH1P58417 271 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 FAM219BQ5XKK7 198 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 TMEM272A0A1B0GTI8 110 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 B4E171 279 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 CTSSP25774 331 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 MDP1Q86V88 176 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 OR4X1Q8NH49 305 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 STARD4Q96DR4 205 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 RIGQ13278 110 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 CADM3Q8N126 398 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 DENND4AQ7Z401 1863 aa11.69□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 MAP1LC3B2A6NCE7 125 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 FFAR1O14842 300 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 RGS13O14921 159 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 HIST3H3Q16695 136 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 MS4A10Q96PG2 267 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 SEC11CQ9BY50 192 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 MAP1LC3BQ9GZQ8 125 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 SNRPGP15A8MWD9 76 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 ISL1P61371 349 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 SELENOTP62341 195 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 PNLIPRP3Q17RR3 467 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 DNAJB12Q9NXW2 375 aaKnown RBP11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 IGHV1OR21-1A0A087WYE8 117 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 CTSVO60911 334 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 GP2P55259 537 aaKnown RBP11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 OR1K1Q8NGR3 316 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 ADAMTS17Q8TE56 1095 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 VSTM2LQ96N03 204 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 NPFFO15130 113 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 KIR2DS2P43631 304 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 AMER3Q8N944 861 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 PERPQ96FX8 193 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 POLR2GP62487 172 aaKnown RBP eCLIP11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 R3HDM4Q96D70 268 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 SOSTQ9BQB4 213 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 WSB1Q9Y6I7 421 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 TRAV8-7A0A075B6U6 113 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 SAPCD1Q5SSQ6 148 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 CADM4Q8NFZ8 388 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 NAT8Q9UHE5 227 aa11.68□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 A0A0A6YYD5 115 aa11.67□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 IGHV1OR15-9A0A0B4J2B8 117 aa11.67□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 TDGF1P13385 188 aa11.67□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 TRA2AQ13595 282 aaKnown RBP eCLIP11.67□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 MRPL54Q6P161 138 aaKnown RBP11.67□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 PHLDA3Q9Y5J5 127 aa11.67□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 MYLKQ15746 1914 aa11.67□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 STARD6P59095 220 aa11.67□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 CD81P60033 236 aa11.67□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 C11orf87Q6NUJ2 197 aa11.67□□□□□ -0.54
NPHP3-ACAD11-201ENST00000471702 NHLRC1Q6VVB1 395 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms