RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 PCOLCE2Q9UKZ9 415 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 MPC1Q9Y5U8 109 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 H0Y980 276 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 PIGYQ3MUY2 71 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 TMEM97Q5BJF2 176 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 MOB3AQ96BX8 217 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 GALNT14Q96FL9 552 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 RSG1Q9BU20 258 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 NDUFAF3Q9BU61 184 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 GREB1LQ9C091 1923 aaPredicted RBP13.81□□□□□ -0.2
SMC4-204ENST00000462787 HELTA6NFD8 242 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 LMO7DNF2Z398 122 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 LY6G6FQ5SQ64 297 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 CARFQ8N187 725 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 URB1O60287 2271 aaKnown RBP13.81□□□□□ -0.2
SMC4-204ENST00000462787 TAF1LQ8IZX4 1826 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 RPS23P62266 143 aaKnown RBP13.81□□□□□ -0.2
SMC4-204ENST00000462787 CPEB3Q8NE35 698 aaKnown RBP13.81□□□□□ -0.2
SMC4-204ENST00000462787 NDFIP1Q9BT67 221 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 WIPI2Q9Y4P8 454 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 COL5A3P25940 1745 aaPredicted RBP13.81□□□□□ -0.2
SMC4-204ENST00000462787 PPOXP50336 477 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 OR4A47Q6IF82 309 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 MRPL54Q6P161 138 aaKnown RBP13.81□□□□□ -0.2
SMC4-204ENST00000462787 OR5R1Q8NH85 324 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 IGHV5-51A0A0C4DH38 117 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 SLC25A5P05141 298 aaKnown RBP13.81□□□□□ -0.2
SMC4-204ENST00000462787 MYOGP15173 224 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 WDR25Q64LD2 544 aaPredicted RBP13.81□□□□□ -0.2
SMC4-204ENST00000462787 RHBDD1Q8TEB9 315 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 PSG11Q9UQ72 335 aa13.81□□□□□ -0.2
SMC4-204ENST00000462787 A0A1W2PP11 408 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 ANKRD37Q7Z713 158 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 TMEM178AQ8NBL3 297 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 ZNF519Q8TB69 540 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 PSG2P11465 335 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 LHX8Q68G74 356 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 LINC00596Q86U02 117 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 BPIFA4PQ86YQ2 179 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 BCL2L2Q92843 193 aaPredicted RBP13.8□□□□□ -0.2
SMC4-204ENST00000462787 HES4Q9HCC6 221 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 DYNLRB1Q9NP97 96 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 TIMM9Q9Y5J7 89 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 CIDEAO60543 219 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 NDUFB7P17568 137 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 F2RP25116 425 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 GAS1P54826 345 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 FBXO46Q6PJ61 603 aaPredicted RBP13.8□□□□□ -0.2
SMC4-204ENST00000462787 BIVMQ86UB2 503 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 OR1L4Q8NGR5 311 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 OR1L3Q8NH93 324 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 PPP1R14DQ9NXH3 145 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 PPP1CAP62136 330 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 LINC00696Q6ZRV3 163 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 H1FXQ92522 213 aaKnown RBP13.8□□□□□ -0.2
SMC4-204ENST00000462787 HSPB8Q9UJY1 196 aa13.8□□□□□ -0.2
SMC4-204ENST00000462787 COLCA2A8K830 154 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 HINT1P49773 126 aaPredicted RBP13.79□□□□□ -0.2
SMC4-204ENST00000462787 CASP6P55212 293 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 RBM11P57052 281 aaKnown RBP13.79□□□□□ -0.2
SMC4-204ENST00000462787 TMEM187Q14656 261 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 ZNF718Q3SXZ3 478 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 Q56UQ5 140 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 SPNS3Q6ZMD2 512 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 MARS2Q96GW9 593 aaKnown RBP13.79□□□□□ -0.2
SMC4-204ENST00000462787 KBTBD11O94819 623 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 BCL3P20749 454 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 RAB7AP51149 207 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 ZXDAP98168 799 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 SPINK9Q5DT21 86 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 OR52M1Q8NGK5 317 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 FER1L6-AS2Q96M78 137 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 SF3B5Q9BWJ5 86 aaKnown RBP13.79□□□□□ -0.2
SMC4-204ENST00000462787 G6PC2Q9NQR9 355 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 AURKAIP1Q9NWT8 199 aaPredicted RBP13.79□□□□□ -0.2
SMC4-204ENST00000462787 SRP19P09132 144 aaKnown RBP13.79□□□□□ -0.2
SMC4-204ENST00000462787 FHL5Q5TD97 284 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 C12orf54Q6X4T0 127 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 OR4P4Q8NGL7 312 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 RBM14Q96PK6 669 aaKnown RBP13.79□□□□□ -0.2
SMC4-204ENST00000462787 CKAP5Q14008 2032 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 MCM3APO60318 1980 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 NDUFA2O43678 99 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 AGAP20933 346 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 SRSF3P84103 164 aaKnown RBP13.79□□□□□ -0.2
SMC4-204ENST00000462787 PSG5Q15238 335 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 CXorf66Q5JRM2 361 aaPredicted RBP13.79□□□□□ -0.2
SMC4-204ENST00000462787 TMEM56Q96MV1 263 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 ATG101Q9BSB4 218 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 OR1A1Q9P1Q5 309 aa13.79□□□□□ -0.2
SMC4-204ENST00000462787 J3QRE1 110 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 ISLRO14498 428 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 R3HDM4Q96D70 268 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 LMX1BO60663 402 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 UBE2L3P68036 154 aaKnown RBP13.78□□□□□ -0.2
SMC4-204ENST00000462787 SCCPDHQ8NBX0 429 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 FAM206AQ9NX38 181 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 TMEM229AB2RXF0 380 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 FAM157CP0CG43 387 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 CA6P23280 308 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms