RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SELLP14151 372 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 OR3A3P47888 321 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 DEFA1P59665 94 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 DEFA3P59666 94 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 GUCA2AQ02747 115 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 BAK1Q16611 211 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 CHRFAM7AQ494W8 412 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 VAX1Q5SQQ9 334 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 STEAP3Q658P3 488 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 C1orf122Q6ZSJ8 110 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 BTN2A1Q7KYR7 527 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 OR5AP2Q8NGF4 316 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 OR4K15Q8NH41 348 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 FAM216AQ8WUB2 273 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 ZFAND2BQ8WV99 257 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 GALMQ96C23 342 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 COX4I2Q96KJ9 171 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 HDHD3Q9BSH5 251 aaPredicted RBP8.84□□□□□ -0.99
RTF1-202ENST00000462276 GAL3ST2Q9H3Q3 398 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 RPUSD1Q9UJJ7 312 aaKnown RBP8.84□□□□□ -0.99
RTF1-202ENST00000462276 ELF5Q9UKW6 265 aaPredicted RBP8.84□□□□□ -0.99
RTF1-202ENST00000462276 CREBBPQ92793 2442 aa8.84□□□□□ -0.99
RTF1-202ENST00000462276 MALRD1Q5VYJ5 2156 aa8.83□□□□□ -1
RTF1-202ENST00000462276 TEP1Q99973 2627 aaKnown RBP8.83□□□□□ -1
RTF1-202ENST00000462276 IGHV4-61A0A0C4DH41 118 aa8.83□□□□□ -1
RTF1-202ENST00000462276 A0A1W2PQ09 198 aa8.83□□□□□ -1
RTF1-202ENST00000462276 J3QRK9 145 aa8.83□□□□□ -1
RTF1-202ENST00000462276 FABP7O15540 132 aa8.83□□□□□ -1
RTF1-202ENST00000462276 ENSAO43768 121 aaKnown RBP8.83□□□□□ -1
RTF1-202ENST00000462276 TFF1P04155 84 aa8.83□□□□□ -1
RTF1-202ENST00000462276 IFNA6P05013 189 aa8.83□□□□□ -1
RTF1-202ENST00000462276 AKAIN1P0CW23 69 aa8.83□□□□□ -1
RTF1-202ENST00000462276 ZNF728P0DKX0 622 aa8.83□□□□□ -1
RTF1-202ENST00000462276 RBMXP38159 391 aaKnown RBP8.83□□□□□ -1
RTF1-202ENST00000462276 ARPC4P59998 168 aa8.83□□□□□ -1
RTF1-202ENST00000462276 HTD2P86397 168 aa8.83□□□□□ -1
RTF1-202ENST00000462276 MADCAM1Q13477 382 aa8.83□□□□□ -1
RTF1-202ENST00000462276 KLF9Q13886 244 aaPredicted RBP8.83□□□□□ -1
RTF1-202ENST00000462276 CDK10Q15131 360 aa8.83□□□□□ -1
RTF1-202ENST00000462276 HMGN3Q15651 99 aa8.83□□□□□ -1
RTF1-202ENST00000462276 RNASE10Q5GAN6 216 aaKnown RBP8.83□□□□□ -1
RTF1-202ENST00000462276 ZNF57Q68EA5 555 aaPredicted RBP8.83□□□□□ -1
RTF1-202ENST00000462276 TMEM200BQ69YZ2 307 aa8.83□□□□□ -1
RTF1-202ENST00000462276 STEAP1BQ6NZ63 245 aa8.83□□□□□ -1
RTF1-202ENST00000462276 MZT2BQ6NZ67 158 aa8.83□□□□□ -1
RTF1-202ENST00000462276 TMEM17Q86X19 198 aa8.83□□□□□ -1
RTF1-202ENST00000462276 LYSMD2Q8IV50 215 aa8.83□□□□□ -1
RTF1-202ENST00000462276 ARRDC1Q8N5I2 433 aa8.83□□□□□ -1
RTF1-202ENST00000462276 LY6G5BQ8NDX9 201 aa8.83□□□□□ -1
RTF1-202ENST00000462276 OR52M1Q8NGK5 317 aa8.83□□□□□ -1
RTF1-202ENST00000462276 OR5H2Q8NGV7 314 aa8.83□□□□□ -1
RTF1-202ENST00000462276 H1FXQ92522 213 aaKnown RBP8.83□□□□□ -1
RTF1-202ENST00000462276 GCDHQ92947 438 aaPredicted RBP8.83□□□□□ -1
RTF1-202ENST00000462276 C1orf159Q96HA4 380 aa8.83□□□□□ -1
RTF1-202ENST00000462276 REG4Q9BYZ8 158 aa8.83□□□□□ -1
RTF1-202ENST00000462276 TAF9BQ9HBM6 251 aa8.83□□□□□ -1
RTF1-202ENST00000462276 ABCB10Q9NRK6 738 aa8.83□□□□□ -1
RTF1-202ENST00000462276 NECAP2Q9NVZ3 263 aa8.83□□□□□ -1
RTF1-202ENST00000462276 SLC23A1Q9UHI7 598 aa8.83□□□□□ -1
RTF1-202ENST00000462276 CHD3Q12873 2000 aaKnown RBP8.83□□□□□ -1
RTF1-202ENST00000462276 ANKRD17O75179 2603 aaKnown RBP8.83□□□□□ -1
RTF1-202ENST00000462276 A0A1B0GW55 424 aa8.82□□□□□ -1
RTF1-202ENST00000462276 B4DSR2 109 aa8.82□□□□□ -1
RTF1-202ENST00000462276 C12orf77C9JDV5 145 aa8.82□□□□□ -1
RTF1-202ENST00000462276 NPIPB11E5RHQ5 1161 aa8.82□□□□□ -1
RTF1-202ENST00000462276 RAB3DO95716 219 aa8.82□□□□□ -1
RTF1-202ENST00000462276 DUX4L2P0CJ85 424 aa8.82□□□□□ -1
RTF1-202ENST00000462276 DUX4L3P0CJ86 424 aa8.82□□□□□ -1
RTF1-202ENST00000462276 DUX4L4P0CJ87 422 aa8.82□□□□□ -1
RTF1-202ENST00000462276 DUX4L5P0CJ88 424 aa8.82□□□□□ -1
RTF1-202ENST00000462276 DUX4L6P0CJ89 424 aa8.82□□□□□ -1
RTF1-202ENST00000462276 DUX4L7P0CJ90 424 aa8.82□□□□□ -1
RTF1-202ENST00000462276 PPIAL4GP0DN37 164 aa8.82□□□□□ -1
RTF1-202ENST00000462276 RCC1P18754 421 aaPredicted RBP8.82□□□□□ -1
RTF1-202ENST00000462276 GATA3P23771 443 aa8.82□□□□□ -1
RTF1-202ENST00000462276 IL2RGP31785 369 aa8.82□□□□□ -1
RTF1-202ENST00000462276 GLP1RP43220 463 aa8.82□□□□□ -1
RTF1-202ENST00000462276 HLA-DRB3P79483 266 aa8.82□□□□□ -1
RTF1-202ENST00000462276 ASAH1Q13510 395 aa8.82□□□□□ -1
RTF1-202ENST00000462276 Q3ZCU0 254 aa8.82□□□□□ -1
RTF1-202ENST00000462276 LY6G6FQ5SQ64 297 aa8.82□□□□□ -1
RTF1-202ENST00000462276 OR52W1Q6IF63 320 aa8.82□□□□□ -1
RTF1-202ENST00000462276 DUX4L9Q6RFH8 374 aaPredicted RBP8.82□□□□□ -1
RTF1-202ENST00000462276 DHRS11Q6UWP2 260 aa8.82□□□□□ -1
RTF1-202ENST00000462276 HEPN1Q6WQI6 88 aa8.82□□□□□ -1
RTF1-202ENST00000462276 OVCH2Q7RTZ1 564 aa8.82□□□□□ -1
RTF1-202ENST00000462276 RTN4RL2Q86UN3 420 aa8.82□□□□□ -1
RTF1-202ENST00000462276 KIR3DL3Q8N743 410 aa8.82□□□□□ -1
RTF1-202ENST00000462276 GVQW1Q8N7I0 195 aa8.82□□□□□ -1
RTF1-202ENST00000462276 MRGPRDQ8TDS7 321 aa8.82□□□□□ -1
RTF1-202ENST00000462276 CCDC107Q8WV48 283 aa8.82□□□□□ -1
RTF1-202ENST00000462276 SNAPC3Q92966 411 aa8.82□□□□□ -1
RTF1-202ENST00000462276 ARL11Q969Q4 196 aa8.82□□□□□ -1
RTF1-202ENST00000462276 ZNF714Q96N38 554 aa8.82□□□□□ -1
RTF1-202ENST00000462276 CABLES2Q9BTV7 478 aa8.82□□□□□ -1
RTF1-202ENST00000462276 NARFLQ9H6Q4 476 aa8.82□□□□□ -1
RTF1-202ENST00000462276 ING3Q9NXR8 418 aa8.82□□□□□ -1
RTF1-202ENST00000462276 CALYQ9NYX4 217 aa8.82□□□□□ -1
RTF1-202ENST00000462276 DUX4Q9UBX2 424 aa8.82□□□□□ -1
RTF1-202ENST00000462276 ZNF230Q9UIE0 474 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms