RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 WDFY1Q8IWB7 410 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 CLEC18CQ8NCF0 446 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 OR5A2Q8NGI9 324 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 RTBDNQ9BSG5 229 aaPredicted RBP10.04□□□□□ -0.8
NPHP4-204ENST00000460696 GFOD1Q9NXC2 390 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 KCNMB2Q9Y691 235 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 IGKV1D-8A0A087WSZ0 117 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 A1L4Q6 167 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 LRP5LA4QPB2 252 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 SYNGR3O43761 229 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 NKX6-1P78426 367 aaPredicted RBP10.04□□□□□ -0.8
NPHP4-204ENST00000460696 NAAAQ02083 359 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 OR8B8Q15620 311 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 HIST2H3PS2Q5TEC6 136 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 ATRAIDQ6UW56 229 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 OR4A16Q8NH70 328 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 LHX4Q969G2 390 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 TLNRD1Q9H1K6 362 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 TAAR3PQ9P1P4 343 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 NDRG3Q9UGV2 375 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 PROCRQ9UNN8 238 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 CRYAAP02489 173 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 HEXAP06865 529 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 MUC1P15941 1255 aaPredicted RBP10.04□□□□□ -0.8
NPHP4-204ENST00000460696 NUBP1P53384 320 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 ADIRFQ15847 76 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 PRAMEF5Q5TYX0 476 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 PRAMEF6Q5VXH4 476 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 ERGIC1Q969X5 290 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 ADGRG7Q96K78 797 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 NUDT16L1Q9BRJ7 211 aaKnown RBP10.04□□□□□ -0.8
NPHP4-204ENST00000460696 DEPPQ9NTK1 212 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 OSGIN2Q9Y236 505 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 V9GYS6 101 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 POLQO75417 2590 aa10.04□□□□□ -0.8
NPHP4-204ENST00000460696 CRYM-AS1A6NIL9 109 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 M0R1B8 84 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 CYTIPO60759 359 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 DYNLT3P51808 116 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 EWSR1Q01844 656 aaKnown RBP eCLIP10.03□□□□□ -0.8
NPHP4-204ENST00000460696 ZNF154Q13106 437 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 FBXW9Q5XUX1 488 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 OR2Z1Q8NG97 314 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 MARVELD3Q96A59 401 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 MED9Q9NWA0 146 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 NCOA6Q14686 2063 aaPredicted RBP10.03□□□□□ -0.8
NPHP4-204ENST00000460696 TRAV17A0A0B4J275 112 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 HKR1P10072 659 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 TNFSF4P23510 183 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 NUFIP2Q7Z417 695 aaKnown RBP10.03□□□□□ -0.8
NPHP4-204ENST00000460696 FAM24BQ8N5W8 94 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 ZIC4Q8N9L1 334 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 OR52M1Q8NGK5 317 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 MRGPRDQ8TDS7 321 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 MMP24Q9Y5R2 645 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 H0YIZ8 118 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 PRRG2O14669 202 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 ARG1P05089 322 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 SELEP16581 610 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 ZNF708P17019 499 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 CLEC12BQ2HXU8 276 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 MPV17LQ2QL34 196 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 CEACAM21Q3KPI0 293 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 CXorf66Q5JRM2 361 aaPredicted RBP10.03□□□□□ -0.8
NPHP4-204ENST00000460696 ZNF787Q6DD87 383 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 FGFBP3Q8TAT2 258 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 MSL2Q9HCI7 577 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 GCM1Q9NP62 436 aa10.03□□□□□ -0.8
NPHP4-204ENST00000460696 HOXD4P09016 255 aaPredicted RBP10.02□□□□□ -0.8
NPHP4-204ENST00000460696 NAT2P11245 290 aa10.02□□□□□ -0.8
NPHP4-204ENST00000460696 ZNF83P51522 516 aa10.02□□□□□ -0.8
NPHP4-204ENST00000460696 NDUFA6P56556 154 aa10.02□□□□□ -0.8
NPHP4-204ENST00000460696 SPINK9Q5DT21 86 aa10.02□□□□□ -0.8
NPHP4-204ENST00000460696 SLC25A40Q8TBP6 338 aa10.02□□□□□ -0.8
NPHP4-204ENST00000460696 FRZBQ92765 325 aa10.02□□□□□ -0.8
NPHP4-204ENST00000460696 TMEM230Q96A57 120 aa10.02□□□□□ -0.8
NPHP4-204ENST00000460696 MRGPRFQ96AM1 343 aa10.02□□□□□ -0.8
NPHP4-204ENST00000460696 NTNG2Q96CW9 530 aa10.02□□□□□ -0.8
NPHP4-204ENST00000460696 HSF4Q9ULV5 492 aa10.02□□□□□ -0.8
NPHP4-204ENST00000460696 UBE2L5PA0A1B0GUS4 154 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 DEDDO75618 318 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 ACTL6AO96019 429 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 LPAR6P43657 344 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 GPR12P47775 334 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 P2RY1P47900 373 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 FGF12P61328 243 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 ZFP36L1Q07352 338 aaKnown RBP10.02□□□□□ -0.81
NPHP4-204ENST00000460696 KIAA0141Q14154 515 aaPredicted RBP10.02□□□□□ -0.81
NPHP4-204ENST00000460696 IZUMO4Q1ZYL8 232 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 RBMS3Q6XE24 437 aaKnown RBP10.02□□□□□ -0.81
NPHP4-204ENST00000460696 POC1AQ8NBT0 407 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 AQP10Q96PS8 301 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 NRIP2Q9BQI9 281 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 PRELID3BQ9Y3B1 194 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 TMEM30CPA0ZSE6 113 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 TMPRSS3P57727 454 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 RUNX1Q01196 453 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 ZNF385CQ66K41 422 aaPredicted RBP10.02□□□□□ -0.81
NPHP4-204ENST00000460696 OR10P1Q8NGE3 313 aa10.02□□□□□ -0.81
NPHP4-204ENST00000460696 RNF166Q96A37 237 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms