RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 FSHBP01225 129 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 MELTFP08582 738 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 CD3GP09693 182 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 IGHV1-8P0DP01 117 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 GNB3P16520 340 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 CCL3L1P16619 93 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 GLP1RP43220 463 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 SRSF7Q16629 238 aaKnown RBP eCLIP11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 ZNF260Q3ZCT1 412 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 CDNFQ49AH0 187 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 HACD4Q5VWC8 232 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 ZNF880Q6PDB4 577 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 C1orf229Q6ZS94 237 aaPredicted RBP11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 VMO1Q7Z5L0 202 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 OR13A1Q8NGR1 328 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 MRPL30Q8TCC3 161 aaKnown RBP11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 NXF2Q9GZY0 626 aaKnown RBP11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 CALYQ9NYX4 217 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 ADAM30Q9UKF2 790 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 KCNK7Q9Y2U2 307 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 SESN1Q9Y6P5 492 aa11.73□□□□□ -0.53
HMGXB4-204ENST00000455359 YLPM1P49750 1951 aaKnown RBP11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 A6NHS1 94 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 SPINT2O43291 252 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 DTYMKP23919 212 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 CDK2P24941 298 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 SRP14P37108 136 aaKnown RBP11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 MNDAP41218 407 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 UBE2E1P51965 193 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 C17orf58Q2M2W7 97 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 CHRFAM7AQ494W8 412 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 TMEM69Q5SWH9 247 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 GPR157Q5UAW9 335 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 OR52M1Q8NGK5 317 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 OR13D1Q8NGV5 346 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 MRGPRDQ8TDS7 321 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 C15orf40Q8WUR7 153 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 TNFRSF14Q92956 283 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 CHMP1AQ9HD42 196 aaPredicted RBP11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 RABL2AQ9UBK7 228 aaPredicted RBP11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 NUP50Q9UKX7 468 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 RABL2BQ9UNT1 228 aa11.72□□□□□ -0.53
HMGXB4-204ENST00000455359 DOCK11Q5JSL3 2073 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 FN1P02751 2386 aaKnown RBP11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 TRAV18A0A075B6X5 111 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 A0A087X0M5 115 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 A0A1B0GX30 115 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 INAFM1C9JVW0 142 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 C15orf65H3BRN8 121 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 CRLF1O75462 422 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 FPR2P25090 351 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 CD34P28906 385 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 TALDO1P37837 337 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 ARFRP1Q13795 201 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 Q3ZCU0 254 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 Q6ZS49 121 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 RTN4RL2Q86UN3 420 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 OR4K15Q8NH41 348 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 MCFD2Q8NI22 146 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 CCDC107Q8WV48 283 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 ARL11Q969Q4 196 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 MMP27Q9H306 513 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 AUNIPQ9H7T9 357 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 IDI2-AS1Q9NZ38 188 aa11.71□□□□□ -0.53
HMGXB4-204ENST00000455359 CENPVL3A0A0U1RRI6 287 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 C12orf77C9JDV5 145 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 F2RL2O00254 374 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 HPGDSO60760 199 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 DIRAS3O95661 229 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 EIF4EP06730 217 aaKnown RBP11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 ELK1P19419 428 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 KIR2DS4P43632 304 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 GNG2P59768 71 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 KIR2DS1Q14954 304 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 HMGN3Q15651 99 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 MIDNQ504T8 468 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 KLF17Q5JT82 389 aaPredicted RBP11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 C9orf139Q6ZV77 190 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 Q71RC1 249 aaPredicted RBP11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 OR11H6Q8NGC7 330 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 KIRREL1Q96J84 757 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 TMEM133Q9H2Q1 129 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 TAF9BQ9HBM6 251 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 Q9N2K0 584 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 SIRT7Q9NRC8 400 aa11.7□□□□□ -0.54
HMGXB4-204ENST00000455359 IGHV1-69DA0A0B4J2H0 117 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 FAM25AB3EWG3 89 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 FAM25CB3EWG5 89 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 FAM25GB3EWG6 89 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 RNASEK-C17orf49H0YIS7 233 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 RGS5O15539 181 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 IGHV1-69P01742 117 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 HOXB4P17483 251 aaPredicted RBP11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 SRD5A1P18405 259 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 RCC1P18754 421 aaPredicted RBP11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 SSTR5P35346 364 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 CBX5P45973 191 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 HTD2P86397 168 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 FOXB2Q5VYV0 432 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 STEAP3Q658P3 488 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms