RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CLEC18BQ6UXF7 455 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 ANGPTL6Q8NI99 470 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 RTN4IP1Q8WWV3 396 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 C2orf50Q96LR7 162 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 TMEM56Q96MV1 263 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 HDHD3Q9BSH5 251 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 SLC2A9Q9NRM0 540 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 JPT1Q9UK76 154 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 LAMP3Q9UQV4 416 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 TMEM56-RWDD3S4R434 201 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 IGKV1D-8A0A087WSZ0 117 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 H0Y980 276 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 SDCBPO00560 298 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 GOSR2O14653 212 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 MPPED1O15442 326 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 SCAF4O95104 1147 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 MMP9P14780 707 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 AADACP22760 399 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 NFYAP23511 347 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 VAMP1P23763 118 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 PIGPP57054 158 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 SNRPD2P62316 118 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 SUPT4H1P63272 117 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 TFF3Q07654 80 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 MSMPQ1L6U9 139 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 SWI5Q1ZZU3 235 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 ZNF672Q499Z4 452 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 LIAT1Q6ZQX7 453 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 C9orf62Q8N4C0 152 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 ITLN1Q8WWA0 313 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 NEU4Q8WWR8 484 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 RDH5Q92781 318 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 RAB39BQ96DA2 213 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 C14orf79Q96F83 325 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 PLPPR2Q96GM1 343 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 TAS2R3Q9NYW6 316 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 PPP1R3CQ9UQK1 317 aa5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 UBE2J1Q9Y385 318 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-210ENST00000454859 TLN1Q9Y490 2541 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 DYSFO75923 2080 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 CLEC18AA5D8T8 446 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 SIRPB1O00241 398 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 F2RL2O00254 374 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 YPEL1O60688 119 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 RAB7AP51149 207 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 H2BFSP57053 126 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 COL10A1Q03692 680 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 TLE1Q04724 770 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 CD300CQ08708 224 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 KRBOX4Q5JUW0 171 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 PRAMEF6Q5VXH4 476 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 C17orf107Q6ZR85 190 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 MOGAT3Q86VF5 341 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 LRP11Q86VZ4 500 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 DMRTC2Q8IXT2 367 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 C8orf31Q8N9H6 132 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 ASCC1Q8N9N2 400 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 CLEC18CQ8NCF0 446 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 ADAD2Q8NCV1 583 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 OR10V1Q8NGI7 309 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 THAP6Q8TBB0 222 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 CD300LFQ8TDQ1 290 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 CAPSLQ8WWF8 208 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 NINJ1Q92982 152 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 ZNF488Q96MN9 340 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 YPEL2Q96QA6 119 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 SLC5A7Q9GZV3 580 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 CELSR3Q9NYQ7 3312 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 IGKV1D-17A0A075B6S4 117 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 MED19A0JLT2 244 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 ZNF729A6NN14 1252 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 E7EQL1 145 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 SIGLEC5O15389 551 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 SPRY3O43610 288 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 UCP1P25874 307 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 PSMB6P28072 239 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 NUP62P37198 522 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 P2RX3P56373 397 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 EIF5AP63241 154 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 IL15RAQ13261 267 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 TMEM187Q14656 261 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 ZNF66Q6ZN08 573 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 ZNF788Q6ZQV5 615 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 FAM219AQ8IW50 185 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 OR52B4Q8NGK2 314 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 PLPPR1Q8TBJ4 325 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 DYRK2Q92630 601 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 LSM10Q969L4 123 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 PDCD10Q9BUL8 212 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 BEX2Q9BXY8 128 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 SHARPINQ9H0F6 387 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 TMEM222Q9H0R3 208 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 SAP30LQ9HAJ7 183 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 BEX1Q9HBH7 125 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 TAF9BQ9HBM6 251 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 LIN7CQ9NUP9 197 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 SH3BGRL2Q9UJC5 107 aa5.73□□□□□ -1.49
ECHDC1-210ENST00000454859 DSCAML1Q8TD84 2053 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms