RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 FAM90A2PQ658T7 463 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 C17orf78Q8N4C9 275 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 GPR146Q96CH1 333 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 SSX3Q99909 188 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 PRDM14Q9GZV8 571 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 SLC25A31Q9H0C2 315 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 ZNF552Q9H707 407 aaPredicted RBP11.66□□□□□ -0.54
POLR1B-209ENST00000448770 ZNF391Q9UJN7 358 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 COLQQ9Y215 455 aaPredicted RBP11.66□□□□□ -0.54
POLR1B-209ENST00000448770 TRAV39A0A0B4J263 110 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 GJE1A6NN92 205 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 TRAPPC6AO75865 159 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 NGFP01138 241 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 HLA-HP01893 362 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 TRGC2P03986 189 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 HSPB1P04792 205 aaKnown RBP11.66□□□□□ -0.54
POLR1B-209ENST00000448770 SOD3P08294 240 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 CEACAM1P13688 526 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 CDX1P47902 265 aaPredicted RBP11.66□□□□□ -0.54
POLR1B-209ENST00000448770 CXCL12P48061 93 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 ZFP36L1Q07352 338 aaKnown RBP11.66□□□□□ -0.54
POLR1B-209ENST00000448770 PDZD11Q5EBL8 140 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 RIPPLY2Q5TAB7 128 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 LYSMD4Q5XG99 296 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 HAPLN4Q86UW8 402 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 CMTM1Q8IZ96 169 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 MRPL30Q8TCC3 161 aaKnown RBP11.66□□□□□ -0.54
POLR1B-209ENST00000448770 ATP5SQ99766 215 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 SPIN2AQ99865 258 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 SPIN2BQ9BPZ2 258 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 REPIN1Q9BWE0 567 aaKnown RBP11.66□□□□□ -0.54
POLR1B-209ENST00000448770 ZNF665Q9H7R5 613 aa11.66□□□□□ -0.54
POLR1B-209ENST00000448770 A0A087WWC5 75 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 LOC102723971A0A1B0GUV8 181 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 KLK3P07288 261 aaPredicted RBP11.65□□□□□ -0.54
POLR1B-209ENST00000448770 TAS2R30P59541 319 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 IL11RAQ14626 422 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 THNSL2Q86YJ6 484 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 OR51H1Q8NH63 302 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 FAM86C1Q9NVL1 165 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 TCFL5Q9UL49 500 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 R4GN57 208 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 WRBO00258 174 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 PSG2P11465 335 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 RPL23AP62750 156 aaKnown RBP11.65□□□□□ -0.54
POLR1B-209ENST00000448770 ARF1P84077 181 aaKnown RBP11.65□□□□□ -0.54
POLR1B-209ENST00000448770 RNPS1Q15287 305 aaKnown RBP11.65□□□□□ -0.54
POLR1B-209ENST00000448770 AKR1C8PQ5T2L2 129 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 WDR5BQ86VZ2 330 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 ZNF610Q8N9Z0 462 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 OR5D13Q8NGL4 314 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 TVP23CQ96ET8 276 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 RPRMQ9NS64 109 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 GNG13Q9P2W3 67 aa11.65□□□□□ -0.54
POLR1B-209ENST00000448770 CHD3Q12873 2000 aaKnown RBP11.64□□□□□ -0.55
POLR1B-209ENST00000448770 BTBD17A6NE02 478 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 PATE3B3GLJ2 98 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 H0Y980 276 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 CYB5BO43169 146 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 HSPA12AO43301 675 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 CYTIPO60759 359 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 IGLV2-14P01704 120 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 CELA3AP09093 270 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 GLIPR1P48060 266 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 FGF8P55075 233 aaPredicted RBP11.64□□□□□ -0.55
POLR1B-209ENST00000448770 MPV17LQ2QL34 196 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 ZNF324BQ6AW86 544 aaPredicted RBP11.64□□□□□ -0.55
POLR1B-209ENST00000448770 PPP1R32Q7Z5V6 425 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 UBALD1Q8TB05 177 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 NEK7Q8TDX7 302 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 ABHD5Q8WTS1 349 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 KCNE4Q8WWG9 221 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 ABHD14BQ96IU4 210 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 OR1A1Q9P1Q5 309 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 ATP23Q9Y6H3 246 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 C5orf49A4QMS7 147 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 P04436 131 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 MDKP21741 143 aaPredicted RBP11.64□□□□□ -0.55
POLR1B-209ENST00000448770 F2RP25116 425 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 GFRA1P56159 465 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 PCBD1P61457 104 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 BAXQ07812 192 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 RDH5Q92781 318 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 CLDN23Q96B33 292 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 GNPNAT1Q96EK6 184 aaPredicted RBP11.64□□□□□ -0.55
POLR1B-209ENST00000448770 GPR61Q9BZJ8 451 aa11.64□□□□□ -0.55
POLR1B-209ENST00000448770 TNRC6AQ8NDV7 1962 aaKnown RBP11.63□□□□□ -0.55
POLR1B-209ENST00000448770 TRAV24A0A0B4J272 114 aa11.63□□□□□ -0.55
POLR1B-209ENST00000448770 FAM90A10PA6NDY2 464 aa11.63□□□□□ -0.55
POLR1B-209ENST00000448770 FAM90A18PA6NE21 464 aa11.63□□□□□ -0.55
POLR1B-209ENST00000448770 FAM90A16PA6NEW6 464 aa11.63□□□□□ -0.55
POLR1B-209ENST00000448770 FAM90A20PA6NIJ5 464 aa11.63□□□□□ -0.55
POLR1B-209ENST00000448770 FAM90A8PA6NJQ4 464 aa11.63□□□□□ -0.55
POLR1B-209ENST00000448770 FAM90A7PA6NKC0 464 aa11.63□□□□□ -0.55
POLR1B-209ENST00000448770 FAM90A22PA8MWA6 464 aa11.63□□□□□ -0.55
POLR1B-209ENST00000448770 FAM90A12PA8MX19 464 aa11.63□□□□□ -0.55
POLR1B-209ENST00000448770 FAM90A5PA8MXJ8 464 aa11.63□□□□□ -0.55
POLR1B-209ENST00000448770 FAM90A23PA8MXZ1 464 aa11.63□□□□□ -0.55
POLR1B-209ENST00000448770 C9J4A7 227 aa11.63□□□□□ -0.55
POLR1B-209ENST00000448770 HS3ST1O14792 307 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms