RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ZNF676Q8N7Q3 588 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 OR51D1Q8NGF3 324 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 GPR150Q8NGU9 434 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 TMEM170AQ8WVE7 144 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 EID2BQ96D98 161 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PRRC1Q96M27 445 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SCGB3A2Q96PL1 93 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 OR2V2Q96R30 315 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 ANAPC13Q9BS18 74 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SSBP4Q9BWG4 385 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 HCAR1Q9BXC0 346 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PLA2G12AQ9BZM1 189 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 ULBP3Q9BZM4 244 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 NMES1Q9C002 83 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 AKIRIN1Q9H9L7 192 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 HINT3Q9NQE9 182 aaKnown RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 CYTL1Q9NRR1 136 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 INPP5EQ9NRR6 644 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 CUTCQ9NTM9 273 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 ASIC5Q9NY37 505 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 EHFQ9NZC4 300 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 LRIT1Q9P2V4 623 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 IKZF2Q9UKS7 526 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 TRAPPC2LQ9UL33 140 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 TRPM6Q9BX84 2022 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PHIPQ8WWQ0 1821 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PPIAL4CA0A0B4J2A2 164 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 LOC100996750A0A140TA64 210 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 GRIFINA4D1Z8 144 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 B5MCH6 92 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FAM72CH0Y354 149 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SNAI2O43623 268 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 DUX1O43812 170 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 CELA3AP09093 270 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SEC11BP0C7V7 166 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PPIAL4GP0DN37 164 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FOLR1P15328 257 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 CRISP2P16562 243 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 NPY1RP25929 384 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 AOAHP28039 575 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 GRNP28799 593 aaKnown RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 TSPOP30536 169 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SRP14P37108 136 aaKnown RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 TNFRSF4P43489 277 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PPICP45877 212 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 TAS2R30P59541 319 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 RND3P61587 244 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 TBPL1P62380 186 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PCBP2Q15366 365 aaKnown RBP eCLIP2.43□□□□□ -2.022e-6■■■■■ 29.1
LIG4-203ENST00000442234 DECR1Q16698 335 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FAM72AQ5TYM5 149 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 STUMQ69YW2 141 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SLC8B1Q6J4K2 584 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FAM72DQ6L9T8 149 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 C12orf54Q6X4T0 127 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 C16orf82Q7Z2V1 217 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FAM72BQ86X60 149 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 CDC20BQ86Y33 519 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 SULF2Q8IWU5 870 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 MAPK1IP1LQ8NDC0 245 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 OR5A2Q8NGI9 324 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 OR51L1Q8NGJ5 315 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 OR6K6Q8NGW6 343 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SUN3Q8TAQ9 357 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 WFDC5Q8TCV5 224 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PTPMT1Q8WUK0 201 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 BLNKQ8WV28 456 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 ANKRD9Q96BM1 317 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 C2orf50Q96LR7 162 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 GNRHR2Q96P88 292 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 IL17FQ96PD4 163 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 AQP10Q96PS8 301 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 GABRG3Q99928 467 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SEMA3CQ99985 751 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 NUDT22Q9BRQ3 303 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 LMF2Q9BU23 707 aaKnown RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 KRTAP4-6Q9BYQ5 205 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SLC39A8Q9C0K1 460 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 WNT10AQ9GZT5 417 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 Q9N2J8 555 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PIGVQ9NUD9 493 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 KIAA1456Q9P272 454 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 ALG1L2C9J202 215 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 G3V4G9 280 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 RNASET2O00584 256 aaKnown RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 ISLRO14498 428 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 TNFRSF10CO14798 259 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 NPIPB7O75200 414 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 HYPMO75409 117 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 S1PR2O95136 353 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SLC2A10O95528 541 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 KNG1P01042 644 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 CTSBP07858 339 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 ADH4P08319 380 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 ERGP11308 486 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 CMPK1P30085 196 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SLC6A9P48067 706 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PPOXP50336 477 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 LIM2P55344 173 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms