RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 IGKV1-27A0A075B6S5 117 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 IGKV1-12A0A0C4DH73 117 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 LOC102723971A0A1B0GUV8 181 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 C3orf80F5H4A9 247 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 IGKV1D-12P01611 117 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 PSG2P11465 335 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 EN2P19622 333 aaPredicted RBP7.81□□□□□ -1.16
COPB1-202ENST00000439561 FUT6P51993 359 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 FAM3BP58499 235 aaPredicted RBP7.81□□□□□ -1.16
COPB1-202ENST00000439561 ZNF92Q03936 586 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 DTX1Q86Y01 620 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 ARV1Q9H2C2 271 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 TUBG2Q9NRH3 451 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 DOCK7Q96N67 2140 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 A0A087WWC5 75 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 B4DEV8 164 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 CXCL13O43927 109 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 BCL3P20749 454 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 SPINK9Q5DT21 86 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 KIAA2026Q5HYC2 2103 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 FIP1L1Q6UN15 594 aaKnown RBP7.81□□□□□ -1.16
COPB1-202ENST00000439561 MCEMP1Q8IX19 187 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 ZNF488Q96MN9 340 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 ANGPTL4Q9BY76 406 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 MSL2Q9HCI7 577 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 GPR27Q9NS67 375 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 VAX2Q9UIW0 290 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 RNF150Q9ULK6 438 aa7.81□□□□□ -1.16
COPB1-202ENST00000439561 IGKV1D-13A0A0B4J2D9 117 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 NPIPB13A6NJU9 1138 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 C9J4A7 227 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 NPIPB4C9JG80 1138 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 TGOLN2O43493 480 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 AMBPP02760 352 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 SERPINA7P05543 415 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 IGKV1-13P0DP09 117 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 EGR1P18146 543 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 CCL1P22362 96 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 CD27P26842 260 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 RBM11P57052 281 aaKnown RBP7.8□□□□□ -1.16
COPB1-202ENST00000439561 FAM78BQ5VT40 261 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 CALHM1Q8IU99 346 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 OR56B2PQ8NGI1 322 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 ADGRG7Q96K78 797 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 ELOVL1Q9BW60 279 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 SCRT1Q9BWW7 348 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 IL36RNQ9UBH0 155 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 PTRH2Q9Y3E5 179 aaKnown RBP7.8□□□□□ -1.16
COPB1-202ENST00000439561 SVILO95425 2214 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 ARHGAP21Q5T5U3 1957 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 KIR2DS1A0A191URI9 304 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 LOC102725191A0A1B0GVB3 256 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 CLEC18AA5D8T8 446 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 EPOPA6NHQ4 379 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 TIAF1O95411 115 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 TMEM50AO95807 157 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 KIR2DS4P43632 304 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 CARD18P57730 90 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 PAX5Q02548 391 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 KIR2DS1Q14954 304 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 SHHQ15465 462 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 IQCJQ1A5X6 159 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 KCNIP4Q6PIL6 250 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 TOMM20LQ6UXN7 152 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 TMEM183AQ8IXX5 376 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 H1FOOQ8IZA3 346 aaPredicted RBP7.8□□□□□ -1.16
COPB1-202ENST00000439561 ZNF664Q8N3J9 261 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 ZNF808Q8N4W9 903 aaPredicted RBP7.8□□□□□ -1.16
COPB1-202ENST00000439561 CLEC18CQ8NCF0 446 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 SAMD10Q9BYL1 202 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 TRAPPC2LQ9UL33 140 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 V9GYS6 101 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 LRRC3CA6NJW4 275 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 KRASP01116 189 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 CRYAAP02489 173 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 MDH2P40926 338 aaKnown RBP7.8□□□□□ -1.16
COPB1-202ENST00000439561 RAB35Q15286 201 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 D2HGDHQ8N465 521 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 ZNF441Q8N8Z8 693 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 HLA-CQ95604 372 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 RCC1LQ96I51 464 aaKnown RBP7.8□□□□□ -1.16
COPB1-202ENST00000439561 NAT8Q9UHE5 227 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 PCDH15Q96QU1 1955 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 NUP210LQ5VU65 1888 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 SZT2Q5T011 3432 aa7.8□□□□□ -1.16
COPB1-202ENST00000439561 A0A1B0GU03 582 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 ZNF732B4DXR9 585 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 EREGO14944 169 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 SYNGR2O43760 224 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 VASH2Q86V25 355 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 OR2T10Q8NGZ9 312 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 MRPL30Q8TCC3 161 aaKnown RBP7.79□□□□□ -1.16
COPB1-202ENST00000439561 FAM131CQ96AQ9 280 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 GPR146Q96CH1 333 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 ZNF501Q96CX3 271 aaPredicted RBP7.79□□□□□ -1.16
COPB1-202ENST00000439561 MS4A10Q96PG2 267 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 CDCA3Q99618 268 aaPredicted RBP7.79□□□□□ -1.16
COPB1-202ENST00000439561 FOXB1Q99853 325 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 DOCK11Q5JSL3 2073 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 C5orf49A4QMS7 147 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms