RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 GALNT14Q96FL9 552 aa14.58□□□□□ -0.07
RIF1-204ENST00000430328 HIGD1AQ9Y241 93 aa14.58□□□□□ -0.07
RIF1-204ENST00000430328 C16orf52Q8NHV5 167 aa14.58□□□□□ -0.08
RIF1-204ENST00000430328 BAHD1Q8TBE0 780 aaPredicted RBP14.58□□□□□ -0.08
RIF1-204ENST00000430328 PHLDA1Q8WV24 401 aaPredicted RBP14.58□□□□□ -0.08
RIF1-204ENST00000430328 FOXB1Q99853 325 aa14.58□□□□□ -0.08
RIF1-204ENST00000430328 A0A087WUJ7 227 aa14.58□□□□□ -0.08
RIF1-204ENST00000430328 RTN4RL1Q86UN2 441 aaPredicted RBP14.58□□□□□ -0.08
RIF1-204ENST00000430328 OR2Y1Q8NGV0 311 aa14.58□□□□□ -0.08
RIF1-204ENST00000430328 GPR27Q9NS67 375 aa14.58□□□□□ -0.08
RIF1-204ENST00000430328 FMN2Q9NZ56 1722 aa14.58□□□□□ -0.08
RIF1-204ENST00000430328 C3orf80F5H4A9 247 aa14.58□□□□□ -0.08
RIF1-204ENST00000430328 KIR2DL4Q99706 377 aa14.58□□□□□ -0.08
RIF1-204ENST00000430328 FRG2CA6NGY1 282 aa14.58□□□□□ -0.08
RIF1-204ENST00000430328 IGHV3-13P01766 116 aa14.58□□□□□ -0.08
RIF1-204ENST00000430328 IGHV3-7P01780 117 aa14.58□□□□□ -0.08
RIF1-204ENST00000430328 OTPQ5XKR4 325 aa14.58□□□□□ -0.08
RIF1-204ENST00000430328 TMEM108Q6UXF1 575 aa14.58□□□□□ -0.08
RIF1-204ENST00000430328 TRAV38-1A0A0B4J264 116 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 VDAC1P21796 283 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 OTX1P32242 354 aaPredicted RBP14.57□□□□□ -0.08
RIF1-204ENST00000430328 RTP5Q14D33 572 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 C1orf220Q5T0J3 134 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.57□□□□□ -0.082e-7■■■■□ 24.8
RIF1-204ENST00000430328 OR2K2Q8NGT1 345 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 RBMY1BA6NDE4 496 aaKnown RBP14.57□□□□□ -0.08
RIF1-204ENST00000430328 RBMY1EA6NEQ0 496 aaKnown RBP14.57□□□□□ -0.08
RIF1-204ENST00000430328 RBMY1DP0C7P1 496 aaKnown RBP14.57□□□□□ -0.08
RIF1-204ENST00000430328 RBMY1A1P0DJD3 496 aaKnown RBP14.57□□□□□ -0.08
RIF1-204ENST00000430328 RBMY1CP0DJD4 496 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 H1FOOQ8IZA3 346 aaPredicted RBP14.57□□□□□ -0.08
RIF1-204ENST00000430328 ZNF707Q96C28 371 aaPredicted RBP14.57□□□□□ -0.08
RIF1-204ENST00000430328 SMOC1Q9H4F8 434 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 CLDN16Q9Y5I7 305 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 EMDP50402 254 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 COX11Q9Y6N1 276 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 CEP250Q9BV73 2442 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 SLC25A42Q86VD7 318 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 DNASE2BQ8WZ79 361 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 RAB1CQ92928 201 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 TSPAN32Q96QS1 320 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 STARD10Q9Y365 291 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 AKAP12Q02952 1782 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 ABLIM3O94929 683 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 SUMO3P55854 103 aaPredicted RBP14.57□□□□□ -0.08
RIF1-204ENST00000430328 ZG16BQ96DA0 208 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 SLIRPQ9GZT3 109 aaKnown RBP14.57□□□□□ -0.08
RIF1-204ENST00000430328 MRPL18Q9H0U6 180 aaKnown RBP14.57□□□□□ -0.08
RIF1-204ENST00000430328 HIST1H1AQ02539 215 aaPredicted RBP14.57□□□□□ -0.08
RIF1-204ENST00000430328 CLLU1OSQ5K130 101 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 OR4D5Q8NGN0 318 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 GPR35Q9HC97 309 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 SPCS1Q9Y6A9 102 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 SCN5AQ14524 2016 aa14.57□□□□□ -0.08
RIF1-204ENST00000430328 TNFSF10P50591 281 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 MRPS11P82912 194 aaKnown RBP14.56□□□□□ -0.08
RIF1-204ENST00000430328 TRBV7-9A0A0J9YWB2 115 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 TRGC2P03986 189 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 AMY1AP04745 511 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 ASB16Q96NS5 453 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 FHITP49789 147 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 SLC26A1Q9H2B4 701 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 ALG1L2C9J202 215 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 IGKV3OR2-268A0A0C4DH90 116 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 ASCL5Q7RTU5 278 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 TM4SF19Q96DZ7 209 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 HSPB7Q9UBY9 170 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 OPN4Q9UHM6 478 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 TMEM262E9PQX1 116 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 CTSDP07339 412 aaPredicted RBP14.56□□□□□ -0.08
RIF1-204ENST00000430328 WDR34Q96EX3 536 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 SPTBN1Q01082 2364 aaKnown RBP14.56□□□□□ -0.08
RIF1-204ENST00000430328 SLC25A1P53007 311 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 OR1L8Q8NGR8 309 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 PRDM14Q9GZV8 571 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 KCNE5Q9UJ90 142 aa14.56□□□□□ -0.08
RIF1-204ENST00000430328 ADAP1O75689 374 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 PYCR3Q53H96 274 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 WDFY2Q96P53 400 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 CXXC4Q9H2H0 198 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 ATRXP46100 2492 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 LINC00862A6NCI5 91 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 H3BMH7 237 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 FGF9P31371 208 aaPredicted RBP14.55□□□□□ -0.08
RIF1-204ENST00000430328 TCF23Q7RTU1 214 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 LRRC29Q8WV35 223 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 CITED1Q99966 193 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 BCL2L10Q9HD36 194 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 YLPM1P49750 1951 aaKnown RBP14.55□□□□□ -0.08
RIF1-204ENST00000430328 F5P12259 2224 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 A0A1B0GU03 582 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 PHOSPHO2Q8TCD6 241 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 CACNA1IQ9P0X4 2223 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 MVB12AQ96EY5 273 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 KLK15Q9H2R5 256 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 C17orf51A8MQB3 221 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 CDKN2AP42771 156 aaKnown RBP14.55□□□□□ -0.08
RIF1-204ENST00000430328 DEFB109BQ30KR1 87 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 ABHD14BQ96IU4 210 aa14.55□□□□□ -0.08
RIF1-204ENST00000430328 HARBI1Q96MB7 349 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms