RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 CALHM2Q9HA72 323 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 MTCH1Q9NZJ7 389 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 ERRFI1Q9UJM3 462 aaPredicted RBP6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 ZNF391Q9UJN7 358 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 TINAGQ9UJW2 476 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 NOSIPQ9Y314 301 aaKnown RBP6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 R4GN57 208 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 FREM1Q5H8C1 2179 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 ESPL1Q14674 2120 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 IGKV1-6A0A0C4DH72 117 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 SYNGR1O43759 233 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 FOXG1P55316 489 aaPredicted RBP6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 IL11RAQ14626 422 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 NMSQ5H8A3 153 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 ZNF383Q8NA42 475 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 OR2Y1Q8NGV0 311 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 CLDND2Q8NHS1 167 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 SCGB1C1Q8TD33 95 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 GPR146Q96CH1 333 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 SGCZQ96LD1 299 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 GPR61Q9BZJ8 451 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 KIR2DS1A0A191URI9 304 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 IFITM10A6NMD0 228 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 CNOT4O95628 575 aaKnown RBP6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 NGFP01138 241 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 METTL15P1P0C7V9 234 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 PSG2P11465 335 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 UCP1P25874 307 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 CD200P41217 278 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 KIR2DS4P43632 304 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 PAX9P55771 341 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 TAS2R30P59541 319 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HLA-DRB3P79483 266 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 KIR2DS1Q14954 304 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 C1QL4Q86Z23 238 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 KCNE4Q8WWG9 221 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 YPEL4Q96NS1 127 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 ATP5SQ99766 215 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 FGF23Q9GZV9 251 aaPredicted RBP6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 ZNF665Q9H7R5 613 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 IGHV3-64DA0A0J9YX35 117 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 K7ESF4 209 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HBE1P02100 147 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HSPB1P04792 205 aaKnown RBP6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 S100GP29377 79 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 FGF12P61328 243 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 NKX6-1P78426 367 aaPredicted RBP6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 IL24Q13007 206 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 ZNF506Q5JVG8 444 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 OR2T2Q6IF00 324 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 C20orf204Q6ZNR8 217 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 MYPOPQ86VE0 399 aaPredicted RBP6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 ZDHHC23Q8IYP9 409 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 LINC00469Q8N7U9 141 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 PLPPR1Q8TBJ4 325 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 PSMF1Q92530 271 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 PRRG4Q9BZD6 226 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 VSIRQ9H7M9 311 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 SH2D2AQ9NP31 389 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 RPRMQ9NS64 109 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 TAAR3PQ9P1P4 343 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 PPP1R3CQ9UQK1 317 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 PPP1R2P9O14990 202 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HIST1H2BKO60814 126 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 NAPSAO96009 420 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HIST1H2BJP06899 126 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 MMP7P09237 267 aaPredicted RBP6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HIST1H2BOP23527 126 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 F2RP25116 425 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HIST1H2BBP33778 126 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 GLIPR1P48060 266 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HIST1H2BDP58876 126 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HIST1H2BCP62807 126 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 BAXQ07812 192 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HIST2H2BEQ16778 126 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HIST1H2BHQ93079 126 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 RBMXL1Q96E39 390 aaKnown RBP6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HIST1H2BNQ99877 126 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 HIST1H2BMQ99879 126 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 C1QTNF5Q9BXJ0 243 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 DEPPQ9NTK1 212 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 LRFN1Q9P244 771 aa6.44□□□□□ -1.38
SMARCC1-202ENST00000425518 FRYQ5TBA9 3013 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 DNPH1O43598 174 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 FOXO1Q12778 655 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 SPINK14Q6IE38 97 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 Q6ZRM9 215 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 LURAP1LQ8IV03 231 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 OR10J5Q8NHC4 309 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 S100PBPQ96BU1 408 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 FAM210BQ96KR6 192 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 TECTBQ96PL2 329 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 ZNF552Q9H707 407 aaPredicted RBP6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 CACNG5Q9UF02 275 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 ATP23Q9Y6H3 246 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 CACNA1DQ01668 2161 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 PINLYPA6NC86 204 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 CD300LBA8K4G0 201 aa6.43□□□□□ -1.38
SMARCC1-202ENST00000425518 PATE3B3GLJ2 98 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms