RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 TOX4O94842 621 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 CD3GP09693 182 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 CGB3P0DN86 165 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 CGB7P0DN87 165 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 ZNF880Q6PDB4 577 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 VMO1Q7Z5L0 202 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 LAX1Q8IWV1 398 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 IZUMO1Q8IYV9 350 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 ZNF565Q8N9K5 539 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 UPRTQ96BW1 309 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 CMSS1Q9BQ75 279 aaKnown RBP13.94□□□□□ -0.18
COL7A1-202ENST00000422991 PCGF1Q9BSM1 259 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 C6orf62Q9GZU0 229 aaPredicted RBP13.94□□□□□ -0.18
COL7A1-202ENST00000422991 RIMS4Q9H426 269 aaPredicted RBP13.94□□□□□ -0.18
COL7A1-202ENST00000422991 METTL8Q9H825 291 aaKnown RBP13.94□□□□□ -0.18
COL7A1-202ENST00000422991 LINC00574Q9H8X3 128 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 CHMP1AQ9HD42 196 aaPredicted RBP13.94□□□□□ -0.18
COL7A1-202ENST00000422991 MBNL3Q9NUK0 354 aaKnown RBP13.94□□□□□ -0.18
COL7A1-202ENST00000422991 CALYQ9NYX4 217 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 ELF5Q9UKW6 265 aaPredicted RBP13.94□□□□□ -0.18
COL7A1-202ENST00000422991 TRAPPC2LQ9UL33 140 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 A3GALT2U3KPV4 340 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 FN1P02751 2386 aaKnown RBP13.93□□□□□ -0.18
COL7A1-202ENST00000422991 KBTBD11-OT1A0A1B0GTJ5 212 aa13.93□□□□□ -0.18
COL7A1-202ENST00000422991 RGS5O15539 181 aa13.93□□□□□ -0.18
COL7A1-202ENST00000422991 RCC1P18754 421 aaPredicted RBP13.93□□□□□ -0.18
COL7A1-202ENST00000422991 SSTR5P35346 364 aa13.93□□□□□ -0.18
COL7A1-202ENST00000422991 C17orf58Q2M2W7 97 aa13.93□□□□□ -0.18
COL7A1-202ENST00000422991 TMEM69Q5SWH9 247 aa13.93□□□□□ -0.18
COL7A1-202ENST00000422991 FAM120AOSQ5T036 256 aa13.93□□□□□ -0.18
COL7A1-202ENST00000422991 C6orf183Q5T699 404 aa13.93□□□□□ -0.18
COL7A1-202ENST00000422991 HACD4Q5VWC8 232 aa13.93□□□□□ -0.18
COL7A1-202ENST00000422991 MOB1BQ7L9L4 216 aa13.93□□□□□ -0.18
COL7A1-202ENST00000422991 AUNIPQ9H7T9 357 aa13.93□□□□□ -0.18
COL7A1-202ENST00000422991 UNKLQ9H9P5 680 aaKnown RBP13.93□□□□□ -0.18
COL7A1-202ENST00000422991 hCG_1809904A0A1W2PP81 198 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 A0A1W2PPE2 198 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 A0A1W2PR64 198 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 A0A1W2PRV1 198 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 POM121CA8CG34 1229 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 FAM25AB3EWG3 89 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 FAM25CB3EWG5 89 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 FAM25GB3EWG6 89 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 FSHBP01225 129 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 PRTN3P24158 256 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 TAS2R20P59543 309 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 MRPS15P82914 257 aaKnown RBP13.92□□□□□ -0.18
COL7A1-202ENST00000422991 ARFRP1Q13795 201 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 PNLIPRP3Q17RR3 467 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 PRAMEF5Q5TYX0 476 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 TRAT1Q6PIZ9 186 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 HEPN1Q6WQI6 88 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 ZNF554Q86TJ5 538 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 DTX3Q8N9I9 347 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 NUDCD2Q8WVJ2 157 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 TNFRSF14Q92956 283 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 MMP27Q9H306 513 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 SIRT7Q9NRC8 400 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 ADAM30Q9UKF2 790 aa13.92□□□□□ -0.18
COL7A1-202ENST00000422991 C12orf77C9JDV5 145 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 NPIPB11E5RHQ5 1161 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 C15orf65H3BRN8 121 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 ORC5O43913 435 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 MMP23AO75900 390 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 MELTFP08582 738 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 FCGR3AP08637 254 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 IGHV1-8P0DP01 117 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 GZMHP20718 246 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 GDNFP39905 211 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 DLX1P56177 255 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 ERVFRD-1P60508 538 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 EXTL2Q9UBQ6 330 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 SESN1Q9Y6P5 492 aa13.91□□□□□ -0.18
COL7A1-202ENST00000422991 TRAV40A0A0B4J280 105 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 SSX5O60225 188 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 PTHLHP12272 177 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 HNF1AP20823 631 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 OMGP23515 440 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 MNDAP41218 407 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 GNG2P59768 71 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 PITPNAQ00169 270 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 PRB3Q04118 309 aaPredicted RBP13.9□□□□□ -0.18
COL7A1-202ENST00000422991 KLRD1Q13241 179 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 HMGN3Q15651 99 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 KLF17Q5JT82 389 aaPredicted RBP13.9□□□□□ -0.18
COL7A1-202ENST00000422991 NCR3LG1Q68D85 454 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 CNIH2Q6PI25 160 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 ZNF782Q6ZMW2 699 aaPredicted RBP13.9□□□□□ -0.18
COL7A1-202ENST00000422991 IL17RELQ6ZVW7 336 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 TEX29Q8N6K0 151 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 SETD6Q8TBK2 473 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 ARL11Q969Q4 196 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 KIRREL1Q96J84 757 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 TAF9BQ9HBM6 251 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 Q9N2K0 584 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 KCNIP1Q9NZI2 227 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 MGAT4AQ9UM21 535 aa13.9□□□□□ -0.18
COL7A1-202ENST00000422991 INAFM1C9JVW0 142 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 RNASEK-C17orf49H0YIS7 233 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 F2RL2O00254 374 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms