RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 WDFY4Q6ZS81 3184 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 IFNA5P01569 189 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 OPN1MWP04001 364 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 TK1P04183 234 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 OPN1MW2P0DN77 364 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 OPN1MW3P0DN78 364 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 APLNRP35414 380 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 CASP6P55212 293 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 MRPS34P82930 218 aaKnown RBP18.24■□□□□ 0.51
USP48-205ENST00000421625 ZNF468Q5VIY5 522 aaPredicted RBP18.24■□□□□ 0.51
USP48-205ENST00000421625 RAET1LQ5VY80 246 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 SLC25A26Q70HW3 274 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 TGIF2LXQ8IUE1 241 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 NECAP1Q8NC96 275 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 OR10A7Q8NGE5 316 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 GAB2Q9UQC2 676 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 G3V3Y1 287 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 PIAS2O75928 621 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 DKK1O94907 266 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 FGF7P21781 194 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 FUT6P51993 359 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 ZNF611Q8N823 705 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 POM121Q96HA1 1249 aa18.24■□□□□ 0.51
USP48-205ENST00000421625 RBM14Q96PK6 669 aaKnown RBP18.24■□□□□ 0.51
USP48-205ENST00000421625 HSPB6O14558 160 aa18.23■□□□□ 0.51
USP48-205ENST00000421625 DVL1O14640 695 aa18.23■□□□□ 0.51
USP48-205ENST00000421625 FAM86C1Q9NVL1 165 aa18.23■□□□□ 0.51
USP48-205ENST00000421625 CEBPZOSA8MTT3 80 aa18.23■□□□□ 0.51
USP48-205ENST00000421625 DFFBO76075 338 aa18.23■□□□□ 0.51
USP48-205ENST00000421625 B4GALT1P15291 398 aa18.23■□□□□ 0.51
USP48-205ENST00000421625 ZNF32P17041 273 aa18.23■□□□□ 0.51
USP48-205ENST00000421625 PLA2G5P39877 138 aa18.23■□□□□ 0.51
USP48-205ENST00000421625 OR2V1Q8NHB1 315 aa18.23■□□□□ 0.51
USP48-205ENST00000421625 LURAP1Q96LR2 239 aa18.23■□□□□ 0.51
USP48-205ENST00000421625 HS3ST6Q96QI5 342 aa18.23■□□□□ 0.51
USP48-205ENST00000421625 DEFB126Q9BYW3 111 aa18.23■□□□□ 0.51
USP48-205ENST00000421625 hCG_38984A0A1B0GV85 526 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 TLE1Q04724 770 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 OR1P1Q8NH06 330 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 Q9N2K0 584 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 CELA2AP08217 269 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 NTF4P34130 210 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 OR8G1Q15617 311 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 SYT13Q7L8C5 426 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 KIAA2026Q5HYC2 2103 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 SDK2Q58EX2 2172 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 DUXBA0A1W2PPF3 345 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 TNFSF11O14788 317 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 TUBG1P23258 451 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 NXPH1P58417 271 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 P2RY6Q15077 328 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 RABEPKQ7Z6M1 372 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 OR6C1Q96RD1 312 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 OR14J1Q9UGF5 321 aa18.22■□□□□ 0.51
USP48-205ENST00000421625 IGKV1-6A0A0C4DH72 117 aa18.21■□□□□ 0.51
USP48-205ENST00000421625 ZNF705GA8MUZ8 300 aaPredicted RBP18.21■□□□□ 0.51
USP48-205ENST00000421625 IL18BPO95998 194 aa18.21■□□□□ 0.51
USP48-205ENST00000421625 ADIRFQ15847 76 aa18.21■□□□□ 0.51
USP48-205ENST00000421625 RNASEH2CQ8TDP1 164 aaKnown RBP18.21■□□□□ 0.51
USP48-205ENST00000421625 GPR146Q96CH1 333 aa18.21■□□□□ 0.51
USP48-205ENST00000421625 SRXN1Q9BYN0 137 aa18.21■□□□□ 0.51
USP48-205ENST00000421625 SRD5A3Q9H8P0 318 aa18.21■□□□□ 0.51
USP48-205ENST00000421625 FKBP2P26885 142 aaKnown RBP18.21■□□□□ 0.51
USP48-205ENST00000421625 SPCS3P61009 180 aa18.21■□□□□ 0.51
USP48-205ENST00000421625 ARL16Q0P5N6 197 aa18.21■□□□□ 0.51
USP48-205ENST00000421625 C16orf82Q7Z2V1 217 aa18.21■□□□□ 0.51
USP48-205ENST00000421625 OR5D13Q8NGL4 314 aa18.21■□□□□ 0.51
USP48-205ENST00000421625 FGFBP3Q8TAT2 258 aa18.21■□□□□ 0.51
USP48-205ENST00000421625 IL36RNQ9UBH0 155 aa18.21■□□□□ 0.51
USP48-205ENST00000421625 TP53TG5Q9Y2B4 290 aa18.21■□□□□ 0.51
USP48-205ENST00000421625 GLB1P16278 677 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 CLEC12BQ2HXU8 276 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 BEND4Q6ZU67 534 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 KMT5CQ86Y97 462 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 GPR137CQ8N3F9 429 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 ALKBH3Q96Q83 286 aaPredicted RBP18.2■□□□□ 0.5
USP48-205ENST00000421625 RBKSQ9H477 322 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 LAMP3Q9UQV4 416 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 A0A0J9YW62 118 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 OR6C6A6NF89 314 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 PGLYRP1O75594 196 aaPredicted RBP18.2■□□□□ 0.5
USP48-205ENST00000421625 VAMP5O95183 116 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 GZMHP20718 246 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 BCL3P20749 454 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 ERVS71-1P61550 626 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 PSG4Q00888 419 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 SCGB1C1Q8TD33 95 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 MBD3L1Q8WWY6 194 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 HIST1H2AAQ96QV6 131 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 NDUFAF3Q9BU61 184 aa18.2■□□□□ 0.5
USP48-205ENST00000421625 XKRY2A2RUG3 117 aa18.19■□□□□ 0.5
USP48-205ENST00000421625 KIAA1324LA8MWY0 1029 aaPredicted RBP18.19■□□□□ 0.5
USP48-205ENST00000421625 SCRG1O75711 98 aa18.19■□□□□ 0.5
USP48-205ENST00000421625 IAPPP10997 89 aa18.19■□□□□ 0.5
USP48-205ENST00000421625 ABLIM2Q6H8Q1 611 aa18.19■□□□□ 0.5
USP48-205ENST00000421625 ACTR3CQ9C0K3 210 aaPredicted RBP18.19■□□□□ 0.5
USP48-205ENST00000421625 CTDSP1Q9GZU7 261 aa18.19■□□□□ 0.5
USP48-205ENST00000421625 AKIRIN1Q9H9L7 192 aaPredicted RBP18.19■□□□□ 0.5
USP48-205ENST00000421625 VAX2Q9UIW0 290 aa18.19■□□□□ 0.5
USP48-205ENST00000421625 H0Y980 276 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms