RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 CXCR6O00574 342 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 MFSD11O43934 449 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 TNFSF13O75888 250 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 RLN1P04808 185 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 SFTA3P0C7M3 94 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 PSMB1P20618 241 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 NFYBP25208 207 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 DCTDP32321 178 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 RPL3P39023 403 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 MTNR1AP48039 350 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 DAPP51397 102 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 ARF3P61204 181 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 SNRPGP62308 76 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 ARF1P84077 181 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 HOXA4Q00056 320 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 BDH1Q02338 343 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 PAX5Q02548 391 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 SMN1Q16637 294 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 SLC36A2Q495M3 483 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 ZNF658BQ4V348 819 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 HECTD2Q5U5R9 776 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 CARD17Q5XLA6 110 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 STEAP1BQ6NZ63 245 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 ENPP6Q6UWR7 440 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 ZNF627Q7L945 461 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 LRRC70Q7Z2Q7 622 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 SLC35E3Q7Z769 313 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 ZDHHC21Q8IVQ6 265 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 GTPBP8Q8N3Z3 284 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 TOMM5Q8N4H5 51 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 TEX29Q8N6K0 151 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 NECAP1Q8NC96 275 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 OR4C5Q8NGB2 326 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 OR51S1Q8NGJ8 323 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 OR5AR1Q8NGP9 310 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 OR9I1Q8NGQ6 314 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 OR13C4Q8NGS5 318 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 ARRDC2Q8TBH0 407 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 THEM6Q8WUY1 208 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 CCDC107Q8WV48 283 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 SMIM4Q8WVI0 70 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 NEUROG1Q92886 237 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 TOMM40LQ969M1 308 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 GPR146Q96CH1 333 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 RAB39BQ96DA2 213 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 MUCL1Q96DR8 90 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 DAZAP1Q96EP5 407 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 CPNE2Q96FN4 548 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 ZNF764Q96H86 408 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 LINC00615Q96LM1 132 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 IMMP2LQ96T52 175 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 ADAT1Q9BUB4 502 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 TPPP3Q9BW30 176 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 FAIM2Q9BWQ8 316 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 LAT2Q9GZY6 243 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 RBKSQ9H477 322 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 ELL3Q9HB65 397 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 HRASLSQ9HDD0 168 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 EXOSC4Q9NPD3 245 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 CBLN4Q9NTU7 201 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 AIG1Q9NVV5 245 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 ASB6Q9NWX5 421 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 FOXJ3Q9UPW0 622 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 COX11Q9Y6N1 276 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 COL7A1Q02388 2944 aa4.64□□□□□ -1.67
ECHDC1-206ENST00000417628 MED12Q93074 2177 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 CADP27708 2225 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 KCNE1BA0A087WTH5 132 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 FXYD6-FXYD2A0A087WZ82 144 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 hCG_1809904A0A1W2PP81 198 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 A0A1W2PR64 198 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 A0A1W2PRV1 198 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 ANKRD20A5PA0PJZ0 165 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 GAGE10A6NGK3 116 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 DHRS7CA6NNS2 312 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 TEX22C9J3V5 150 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 CORTO00230 105 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 GABRPO00591 440 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 RRHO14718 337 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 TBX19O60806 448 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 RAD51DO75771 328 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 OR6A2O95222 327 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 LCATP04180 440 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 P04436 131 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 ANXA4P09525 319 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 CT45A8P0DMV1 189 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 CT45A9P0DMV2 189 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 FABP4P15090 132 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 HOXB9P17482 250 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 MAOAP21397 527 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 UCP1P25874 307 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 OR10J1P30954 320 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 RBM34P42696 430 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 XCR1P46094 333 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 GPR12P47775 334 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 NPY4RP50391 375 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 EFNA4P52798 201 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 NDUFA6P56556 154 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 TSTA3Q13630 321 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 TTLL9Q3SXZ7 439 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms