RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 A8MV72 311 aaPredicted RBP13.07□□□□□ -0.32
HMGA1-204ENST00000401473 FAM25AB3EWG3 89 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 FAM25CB3EWG5 89 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 FAM25GB3EWG6 89 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 MELTFP08582 738 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 SSTR5P35346 364 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 CNPY1Q3B7I2 92 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 TMEM69Q5SWH9 247 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 BAIAP2L2Q6UXY1 529 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 C1orf122Q6ZSJ8 110 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 RFESDQ8TAC1 157 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 UBALD1Q8TB05 177 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 GCDHQ92947 438 aaPredicted RBP13.07□□□□□ -0.32
HMGA1-204ENST00000401473 TBX15Q96SF7 602 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 PCGF1Q9BSM1 259 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 AUNIPQ9H7T9 357 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 LPAR3Q9UBY5 353 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 ZNF230Q9UIE0 474 aaPredicted RBP13.07□□□□□ -0.32
HMGA1-204ENST00000401473 KCNS2Q9ULS6 477 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 MRPS7Q9Y2R9 242 aaKnown RBP13.07□□□□□ -0.32
HMGA1-204ENST00000401473 KPTNQ9Y664 436 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 A3GALT2U3KPV4 340 aa13.07□□□□□ -0.32
HMGA1-204ENST00000401473 KBTBD11-OT1A0A1B0GTJ5 212 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 C15orf65H3BRN8 121 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 SSX5O60225 188 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 TOX4O94842 621 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 GSTP1P09211 210 aaKnown RBP13.06□□□□□ -0.32
HMGA1-204ENST00000401473 GZMHP20718 246 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 TNFSF8P32971 234 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 GDNFP39905 211 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 GLP1RP43220 463 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 TAS2R20P59543 309 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 UTF1Q5T230 341 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 METTL11BQ5VVY1 283 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 ZNF880Q6PDB4 577 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 NUDCD2Q8WVJ2 157 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 TNFRSF14Q92956 283 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 SIRT7Q9NRC8 400 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 TAS2R3Q9NYW6 316 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 EXTL2Q9UBQ6 330 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 JMJD1CQ15652 2540 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 TRBV6-6A0A0A6YYG2 114 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 INAFM1C9JVW0 142 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 J3QLI3 93 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 M0R1W7 72 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 ARFRP1Q13795 201 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 CNIH2Q6PI25 160 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 KIR3DL3Q8N743 410 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 ABHD1Q96SE0 405 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 LINC00574Q9H8X3 128 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 C12orf4Q9NQ89 552 aa13.06□□□□□ -0.32
HMGA1-204ENST00000401473 MEIOCA2RUB1 952 aa13.05□□□□□ -0.32
HMGA1-204ENST00000401473 C12orf77C9JDV5 145 aa13.05□□□□□ -0.32
HMGA1-204ENST00000401473 NPIPB11E5RHQ5 1161 aa13.05□□□□□ -0.32
HMGA1-204ENST00000401473 CD3GP09693 182 aa13.05□□□□□ -0.32
HMGA1-204ENST00000401473 ARL6IP1Q15041 203 aa13.05□□□□□ -0.32
HMGA1-204ENST00000401473 FAM53AQ6NSI3 398 aaPredicted RBP13.05□□□□□ -0.32
HMGA1-204ENST00000401473 VMO1Q7Z5L0 202 aa13.05□□□□□ -0.32
HMGA1-204ENST00000401473 ARL11Q969Q4 196 aa13.05□□□□□ -0.32
HMGA1-204ENST00000401473 DIRAS2Q96HU8 199 aa13.05□□□□□ -0.32
HMGA1-204ENST00000401473 RIMS4Q9H426 269 aaPredicted RBP13.05□□□□□ -0.32
HMGA1-204ENST00000401473 METTL8Q9H825 291 aaKnown RBP13.05□□□□□ -0.32
HMGA1-204ENST00000401473 UNKLQ9H9P5 680 aaKnown RBP13.05□□□□□ -0.32
HMGA1-204ENST00000401473 TAF9BQ9HBM6 251 aa13.05□□□□□ -0.32
HMGA1-204ENST00000401473 CHMP1AQ9HD42 196 aaPredicted RBP13.05□□□□□ -0.32
HMGA1-204ENST00000401473 Q9N2K0 584 aa13.05□□□□□ -0.32
HMGA1-204ENST00000401473 CALYQ9NYX4 217 aa13.05□□□□□ -0.32
HMGA1-204ENST00000401473 A0A1W2PPH5 198 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 ZNF729A6NN14 1252 aaPredicted RBP13.04□□□□□ -0.32
HMGA1-204ENST00000401473 FCGR3AP08637 254 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 IGHV1-8P0DP01 117 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 PRTN3P24158 256 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 GUCA2AQ02747 115 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 PNLIPRP3Q17RR3 467 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 KLF17Q5JT82 389 aaPredicted RBP13.04□□□□□ -0.32
HMGA1-204ENST00000401473 FAM120AOSQ5T036 256 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 HEPN1Q6WQI6 88 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 ZNF782Q6ZMW2 699 aaPredicted RBP13.04□□□□□ -0.32
HMGA1-204ENST00000401473 IL17RELQ6ZVW7 336 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 PRR18Q8N4B5 295 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 MAFIPQ8WZ33 124 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 UPRTQ96BW1 309 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 IGKV1D-8A0A087WSZ0 117 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 ORC5O43913 435 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 MNDAP41218 407 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 PRAMEF5Q5TYX0 476 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 HCP5Q6MZN7 132 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 SNX29P2Q8IUI4 249 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 PDZD9Q8IXQ8 264 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 SETD6Q8TBK2 473 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 KIRREL1Q96J84 757 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 SOSTQ9BQB4 213 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 GAL3ST2Q9H3Q3 398 aa13.04□□□□□ -0.32
HMGA1-204ENST00000401473 CENPVL3A0A0U1RRI6 287 aa13.03□□□□□ -0.32
HMGA1-204ENST00000401473 RNASEK-C17orf49H0YIS7 233 aa13.03□□□□□ -0.32
HMGA1-204ENST00000401473 HBZP02008 142 aa13.03□□□□□ -0.32
HMGA1-204ENST00000401473 SCTP09683 121 aa13.03□□□□□ -0.32
HMGA1-204ENST00000401473 GNG2P59768 71 aa13.03□□□□□ -0.32
HMGA1-204ENST00000401473 KLRD1Q13241 179 aa13.03□□□□□ -0.32
HMGA1-204ENST00000401473 GVQW1Q8N7I0 195 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms