RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 UPK1AO00322 258 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 ZNF354AO60765 605 aaPredicted RBP9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 FCGR3AP08637 254 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 RPS4XP62701 263 aaKnown RBP9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 SIGLEC11Q96RL6 698 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 ADGRL4Q9HBW9 690 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 IGHV3-72A0A0B4J1Y9 119 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 CEACAM1P13688 526 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 GNG4P50150 75 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 AANATQ16613 207 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 OR2C3Q8N628 320 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 FDCSPQ8NFU4 85 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 GPX8Q8TED1 209 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 BTAF1O14981 1849 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 PRSS2P07478 247 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 PRB4P10163 310 aaPredicted RBP9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 CD33P20138 364 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 TMEM215Q68D42 235 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 ZNF343Q6P1L6 599 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 ASCL4Q6XD76 172 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 ZNF66Q6ZN08 573 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 C16orf82Q7Z2V1 217 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 GTSCR1Q86UQ5 136 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 LINC01465Q8N7H1 131 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 OR5AP2Q8NGF4 316 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 C10orf90Q96M02 699 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 PSCAO43653 123 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 MPDU1O75352 247 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 LIMK1P53667 647 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 SNRPNP63162 240 aaKnown RBP9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 OTUD1Q5VV17 481 aaPredicted RBP9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 FAM122BQ7Z309 247 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 OR2W3Q7Z3T1 314 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 OR51S1Q8NGJ8 323 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 OR4S2Q8NH73 311 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 TMEM204Q9BSN7 226 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 FGF20Q9NP95 211 aaPredicted RBP9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 FCGR2BP31994 310 aaPredicted RBP9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 DRD3P35462 400 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 ATP5G2Q06055 141 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 FAM181AQ8N9Y4 354 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 FAM222BQ8WU58 562 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 MARVELD1Q9BSK0 173 aa9.65□□□□□ -0.86
CACNA1C-216ENST00000399638 A0A0A6YYJ9 748 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 SNRPGP15A8MWD9 76 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 THY1P04216 161 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 CCL3P10147 92 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 FUT3P21217 361 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 RPL31P62899 125 aaKnown RBP9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 TMEM183BQ1AE95 376 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 SSC4DQ8WTU2 575 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 ZNF707Q96C28 371 aaPredicted RBP9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 HARBI1Q96MB7 349 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 SIRT7Q9NRC8 400 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 ASXL3Q9C0F0 2248 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 A0A1B0GU03 582 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 CA2P00918 260 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 FAM209AQ5JX71 171 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 SAMD13Q5VXD3 122 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 PDPNQ86YL7 162 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 RASL10BQ96S79 203 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 NEU1Q99519 415 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 NUDT16L1Q9BRJ7 211 aaKnown RBP9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 ZNF426Q9BUY5 554 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 SLC25A19Q9HC21 320 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 ZNF275Q9NSD4 429 aaPredicted RBP9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 SLC25A37Q9NYZ2 338 aa9.65□□□□□ -0.87
CACNA1C-216ENST00000399638 A0A1W2PPE3 182 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 TMEM210A6NLX4 147 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 TMEM229AB2RXF0 380 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 PMS2P2O95744 297 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 CCL13Q99616 98 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 FFAR1O14842 300 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 FAM78BQ5VT40 261 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 OR4S1Q8NGB4 309 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 OR1L6Q8NGR2 347 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 SLC45A2Q9UMX9 530 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 FOXJ3Q9UPW0 622 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 RER1O15258 196 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 IGLV3-25P01717 112 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 ADRB1P08588 477 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 SPNP16150 400 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 INO80CQ6PI98 192 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 MDP1Q86V88 176 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 TMEM251Q8N6I4 163 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 ZPLD1Q8TCW7 415 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 NPAS1Q99742 590 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 HSPB8Q9UJY1 196 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 B9D1Q9UPM9 204 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 CD96P40200 585 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 RANP62826 216 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 FMODQ06828 376 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 MRPL58Q14197 206 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 ANKRD55Q3KP44 614 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 UQCC3Q6UW78 93 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 NUDCD2Q8WVJ2 157 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 ZNF714Q96N38 554 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 SLC52A3Q9NQ40 469 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 TUBD1Q9UJT1 453 aa9.64□□□□□ -0.87
CACNA1C-216ENST00000399638 VDAC2P45880 294 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms