RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 OR2M3Q8NG83 312 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 PLPPR2Q96GM1 343 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 ABHD14BQ96IU4 210 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 PHF7Q9BWX1 381 aaPredicted RBP9.64□□□□□ -0.87
HPS4-202ENST00000398145 SH3BGRL3Q9H299 93 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 SIP14410 1827 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 DHRS7CA6NNS2 312 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 FCGR3BO75015 233 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 ADAM11O75078 769 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 TOX4O94842 621 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 F2RP25116 425 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 RBM11P57052 281 aaKnown RBP9.64□□□□□ -0.87
HPS4-202ENST00000398145 PLPPR5Q32ZL2 321 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 WDR73Q6P4I2 378 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 VASH2Q86V25 355 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 OR5AU1Q8NGC0 362 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 ZNF385AQ96PM9 386 aaKnown RBP9.64□□□□□ -0.87
HPS4-202ENST00000398145 TRIB1Q96RU8 372 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 RSG1Q9BU20 258 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 TGIF2-C20orf24A0A0A6YYL0 155 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 A0A1W2PR80 420 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 ZNF253O75346 499 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 CYC1P08574 325 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 OR3A1P47881 315 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 MEF2BQ02080 365 aaPredicted RBP9.64□□□□□ -0.87
HPS4-202ENST00000398145 SMAD4Q13485 552 aaKnown RBP9.64□□□□□ -0.87
HPS4-202ENST00000398145 SDK2Q58EX2 2172 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 FAM27BQ5VT28 67 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 C16orf82Q7Z2V1 217 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 DTD1Q8TEA8 209 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 DEFB127Q9H1M4 99 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 IL17BQ9UHF5 180 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 CA11O75493 328 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 GCGP01275 180 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 NDUFB7P17568 137 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 NXPH1P58417 271 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 MOB3AQ96BX8 217 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 SLC45A2Q9UMX9 530 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 PSG11Q9UQ72 335 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 SPTA1P02549 2419 aa9.64□□□□□ -0.87
HPS4-202ENST00000398145 SBF1O95248 1867 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 PSME4Q14997 1843 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 IGHV1OR15-9A0A0B4J2B8 117 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 C2CD4DB7Z1M9 353 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 BPIFB3P59826 476 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 GUSBP11Q6P575 273 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.63□□□□□ -0.87
HPS4-202ENST00000398145 OR52M1Q8NGK5 317 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 ADIPOR1Q96A54 375 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 GFI1Q99684 422 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 BET1LQ9NYM9 111 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 HEATR5BQ9P2D3 2071 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 DOCK6Q96HP0 2047 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 FGF16O43320 207 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 PDE6DO43924 150 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 TRGC1P0CF51 173 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 BCL3P20749 454 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 IGLV3-21P80748 117 aaPredicted RBP9.63□□□□□ -0.87
HPS4-202ENST00000398145 IL11RAQ14626 422 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 SPINK9Q5DT21 86 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 Q6ZN92 141 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 SPEM1Q8N4L4 309 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 DEFB108BQ8NET1 73 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 TUBA4BQ9H853 241 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 PAM16Q9Y3D7 125 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 A0A087WV48 116 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 ZNF729A6NN14 1252 aaPredicted RBP9.63□□□□□ -0.87
HPS4-202ENST00000398145 TOX3O15405 576 aaPredicted RBP9.63□□□□□ -0.87
HPS4-202ENST00000398145 GYPAP02724 150 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 RPLP1P05386 114 aaKnown RBP9.63□□□□□ -0.87
HPS4-202ENST00000398145 PSG2P11465 335 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 COX19Q49B96 90 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 OR4A4PQ8NGN8 299 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 SCARF2Q96GP6 870 aaPredicted RBP9.63□□□□□ -0.87
HPS4-202ENST00000398145 OR2H1Q9GZK4 316 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 DYNLRB1Q9NP97 96 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 TMEM74BQ9NUR3 256 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 GBF1Q92538 1859 aa9.63□□□□□ -0.87
HPS4-202ENST00000398145 TDRD6O60522 2096 aaKnown RBP9.63□□□□□ -0.87
HPS4-202ENST00000398145 LYPD3O95274 346 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 CTSBP07858 339 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 GLIPR1P48060 266 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 TFF2Q03403 129 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 OR5I1Q13606 314 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 RPEL1Q2QD12 228 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 SLC25A47Q6Q0C1 308 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 OR10AD1Q8NGE0 317 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 OR1P1Q8NH06 330 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 SGMS2Q8NHU3 365 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 H1FXQ92522 213 aaKnown RBP9.62□□□□□ -0.87
HPS4-202ENST00000398145 POM121L2Q96KW2 1035 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 TBX15Q96SF7 602 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 GDF15Q99988 308 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 RNF126Q9BV68 326 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 TMEM38BQ9NVV0 291 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 NKX6-3A6NJ46 265 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 PRR32B1ATL7 298 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 FBP1P09467 338 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 CT45A10P0DMU9 189 aa9.62□□□□□ -0.87
HPS4-202ENST00000398145 OR1K1Q8NGR3 316 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms