RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 HOXB3P14651 431 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 FABP4P15090 132 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 CSF2RBP32927 897 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 ANKRD55Q3KP44 614 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 LGALSLQ3ZCW2 172 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 RBPMS2Q6ZRY4 209 aaKnown RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 PLAC1Q9HBJ0 212 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 MRPS18AQ9NVS2 196 aaKnown RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 COA4Q9NYJ1 87 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 CCL27Q9Y4X3 112 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 KIAA2026Q5HYC2 2103 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 AHRRA9YTQ3 701 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 SOCS1O15524 211 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 IL9P15248 144 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 MLF1P58340 268 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 C19orf57Q0VDD7 668 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 MRGPRGQ86SM5 289 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 TGIF2LYQ8IUE0 185 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 CDX2Q99626 313 aaPredicted RBP4.79□□□□□ -1.64
VPS13C-204ENST00000395898 OR2H1Q9GZK4 316 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 SIRT7Q9NRC8 400 aa4.79□□□□□ -1.64
VPS13C-204ENST00000395898 IGHV3-43A0A0B4J1X8 118 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 A0A1B0GTH9 108 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 ISLRO14498 428 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 SCO1O75880 301 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 IGHV3-43DP0DP04 118 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 RNASEKQ6P5S7 137 aaKnown RBP4.78□□□□□ -1.64
VPS13C-204ENST00000395898 OR8I2Q8N0Y5 310 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 OR2M3Q8NG83 312 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 OR1L6Q8NGR2 347 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 OR2T10Q8NGZ9 312 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 LOXL4Q96JB6 756 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 IFI6P09912 130 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 AREGP15514 252 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 HERVK_113P61574 105 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 HOXA4Q00056 320 aaPredicted RBP4.78□□□□□ -1.64
VPS13C-204ENST00000395898 ZNF345Q14585 488 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 BSXQ3C1V8 233 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 DCAF10Q5QP82 559 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 FAM78BQ5VT40 261 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 DTD1Q8TEA8 209 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 NPVFQ9HCQ7 196 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 CEP290O15078 2479 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 CD160O95971 181 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 CD1AP06126 327 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 CRHP06850 196 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 NGFRP08138 427 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 CRISP2P16562 243 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 CAMPP49913 170 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 OR1L8Q8NGR8 309 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 PGLYRP3Q96LB9 341 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 MS4A10Q96PG2 267 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 RBM38Q9H0Z9 239 aaKnown RBP4.78□□□□□ -1.64
VPS13C-204ENST00000395898 ASCL3Q9NQ33 180 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 BET1LQ9NYM9 111 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 HELTA6NFD8 242 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 IFNL4K9M1U5 179 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 NPY1RP25929 384 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 PSG5Q15238 335 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 STPG2Q8N412 459 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 NPAS1Q99742 590 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 GPR35Q9HC97 309 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 MFNGO00587 321 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 CIDEAO60543 219 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 MC5RP33032 325 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 PMELP40967 661 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 P2RY6Q15077 328 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 OR10G8Q8NGN5 311 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 ANGPTL4Q9BY76 406 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 FLRT3Q9NZU0 649 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 SLC25A10Q9UBX3 287 aaPredicted RBP4.78□□□□□ -1.64
VPS13C-204ENST00000395898 J3QT63 122 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 MPDU1O75352 247 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 COMPP49747 757 aaPredicted RBP4.78□□□□□ -1.64
VPS13C-204ENST00000395898 RPL31P62899 125 aaKnown RBP4.78□□□□□ -1.64
VPS13C-204ENST00000395898 FAM27BQ5VT28 67 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 C10orf113Q5VZT2 155 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 SEZ6L2Q6UXD5 910 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 GAPTQ8N292 157 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 ZNF721Q8TF20 911 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 J3QR06 171 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 M0R2Z0 102 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 PATE4P0C8F1 98 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 CCL4P13236 92 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 SERF2P84101 59 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 PHF3Q92576 2039 aaKnown RBP4.78□□□□□ -1.64
VPS13C-204ENST00000395898 RAB24Q969Q5 203 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 CLEC5AQ9NY25 188 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 V9GYH0 126 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 OR4C45A6NMZ5 311 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 NDUFA2O43678 99 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 CCL3P10147 92 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 CLEC18BQ6UXF7 455 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 C9orf40Q8IXQ3 194 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 UBALD1Q8TB05 177 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 SP7Q8TDD2 431 aaPredicted RBP4.78□□□□□ -1.64
VPS13C-204ENST00000395898 TMEM171Q8WVE6 324 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 GHITMQ9H3K2 345 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 UBTD1Q9HAC8 227 aa4.78□□□□□ -1.64
VPS13C-204ENST00000395898 DCAF16Q9NXF7 216 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms