RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 MYO7BQ6PIF6 2116 aa16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 NBASA2RRP1 2371 aa16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 PRSS44E7EML9 344 aa16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 EIF3GO75821 320 aaKnown RBP eCLIP16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 S100A8P05109 93 aa16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 AGAP20933 346 aa16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 ARR3P36575 388 aa16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 SP6Q3SY56 376 aa16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 AWAT1Q58HT5 328 aa16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 BORCS8Q96FH0 119 aa16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 MARS2Q96GW9 593 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 POM121Q96HA1 1249 aa16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 RGCCQ9H4X1 137 aa16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 ZNF286AQ9HBT8 521 aa16.97■□□□□ 0.31
CSNK1D-203ENST00000392334 FAM230AA0A1W2PPH8 454 aa16.96■□□□□ 0.31
CSNK1D-203ENST00000392334 UBE2CO00762 179 aa16.96■□□□□ 0.31
CSNK1D-203ENST00000392334 CAMLGP49069 296 aa16.96■□□□□ 0.31
CSNK1D-203ENST00000392334 PLP2Q04941 152 aa16.96■□□□□ 0.31
CSNK1D-203ENST00000392334 C1orf185Q5T7R7 199 aa16.96■□□□□ 0.31
CSNK1D-203ENST00000392334 ETV3LQ6ZN32 361 aa16.96■□□□□ 0.31
CSNK1D-203ENST00000392334 MYPOPQ86VE0 399 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-203ENST00000392334 CCDC71LQ8N9Z2 235 aa16.96■□□□□ 0.31
CSNK1D-203ENST00000392334 OR10AD1Q8NGE0 317 aa16.96■□□□□ 0.31
CSNK1D-203ENST00000392334 FAM57AQ8TBR7 257 aa16.96■□□□□ 0.31
CSNK1D-203ENST00000392334 RSRP1Q9BUV0 290 aa16.96■□□□□ 0.31
CSNK1D-203ENST00000392334 FBXO9Q9UK97 447 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-203ENST00000392334 TMED3Q9Y3Q3 217 aa16.96■□□□□ 0.31
CSNK1D-203ENST00000392334 C7orf77A4D0Y5 90 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 ST8SIA3O43173 380 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 WDR1O75083 606 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 NGFP01138 241 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 CELA3BP08861 270 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 ACAA1P09110 424 aaPredicted RBP16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 TGFBR3Q03167 851 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 GFRALQ6UXV0 394 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 FBXW12Q6X9E4 464 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 OSR2Q8N2R0 312 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 LFNGQ8NES3 379 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 OR4D5Q8NGN0 318 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 PLSCR4Q9NRQ2 329 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 ZNF581Q9P0T4 197 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 TINAGQ9UJW2 476 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 PROCRQ9UNN8 238 aa16.96■□□□□ 0.3
CSNK1D-203ENST00000392334 SMIM6P0DI80 62 aa16.95■□□□□ 0.3
CSNK1D-203ENST00000392334 SNRPEP62304 92 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-203ENST00000392334 SLC22A25Q6T423 547 aa16.95■□□□□ 0.3
CSNK1D-203ENST00000392334 SMDT1Q9H4I9 107 aa16.95■□□□□ 0.3
CSNK1D-203ENST00000392334 C11orf1Q9H5F2 150 aa16.95■□□□□ 0.3
CSNK1D-203ENST00000392334 INTS1Q8N201 2190 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-203ENST00000392334 IGKV1-12A0A0C4DH73 117 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 AGFG2O95081 481 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 DIRAS3O95661 229 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 NRASP01111 189 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 IGKV1D-12P01611 117 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 ZNF44P15621 663 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 UBE2NP61088 152 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 ZNF616Q08AN1 781 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 RHEBQ15382 184 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 GABRA6Q16445 453 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 TMEM211Q6ICI0 200 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 CXorf67Q86X51 503 aaPredicted RBP16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 POM121L2Q96KW2 1035 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 PBDC1Q9BVG4 233 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 C1QTNF5Q9BXJ0 243 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 SPACA1Q9HBV2 294 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 SHANK1Q9Y566 2161 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 GEMIN2O14893 280 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 CGAP01215 116 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 SFTPCP11686 197 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 GLP1RP43220 463 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 FXYD4P59646 89 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 CLEC9AQ6UXN8 241 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 DOLPP1Q86YN1 238 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 OR52M1Q8NGK5 317 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 NANOS1Q8WY41 292 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 MALSU1Q96EH3 234 aa16.94■□□□□ 0.3
CSNK1D-203ENST00000392334 XRCC2O43543 280 aa16.93■□□□□ 0.3
CSNK1D-203ENST00000392334 PDCD6O75340 191 aa16.93■□□□□ 0.3
CSNK1D-203ENST00000392334 APLNRP35414 380 aa16.93■□□□□ 0.3
CSNK1D-203ENST00000392334 FUT6P51993 359 aa16.93■□□□□ 0.3
CSNK1D-203ENST00000392334 SRPXP78539 464 aa16.93■□□□□ 0.3
CSNK1D-203ENST00000392334 EIF2S3LQ2VIR3 472 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-203ENST00000392334 PHLDA2Q53GA4 152 aa16.93■□□□□ 0.3
CSNK1D-203ENST00000392334 FAM185AQ8N0U4 392 aa16.93■□□□□ 0.3
CSNK1D-203ENST00000392334 TECTBQ96PL2 329 aa16.93■□□□□ 0.3
CSNK1D-203ENST00000392334 PARP12Q9H0J9 701 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-203ENST00000392334 SLC35B3Q9H1N7 401 aa16.93■□□□□ 0.3
CSNK1D-203ENST00000392334 RCL1Q9Y2P8 373 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-203ENST00000392334 K7N7A8 449 aa16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 CDS2O95674 445 aa16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 SNRNP70P08621 437 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 MAS1LP35410 378 aa16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 IDH3GP51553 393 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 PIGYQ3MUY2 71 aa16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 ALKBH2Q6NS38 261 aa16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 OR5L1Q8NGL2 311 aa16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 EIF5A2Q9GZV4 153 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 METTL1Q9UBP6 276 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 ZFYVE26Q68DK2 2539 aa16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 hCG_38984A0A1B0GV85 526 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms