RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 MRGPRDQ8TDS7 321 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 TNFRSF14Q92956 283 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 CMSS1Q9BQ75 279 aaKnown RBP12.68□□□□□ -0.38
PDGFB-202ENST00000381551 HDHD3Q9BSH5 251 aaPredicted RBP12.68□□□□□ -0.38
PDGFB-202ENST00000381551 MIXL1Q9H2W2 232 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 GAL3ST2Q9H3Q3 398 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 METTL8Q9H825 291 aaKnown RBP12.68□□□□□ -0.38
PDGFB-202ENST00000381551 BATF3Q9NR55 127 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 MBNL3Q9NUK0 354 aaKnown RBP12.68□□□□□ -0.38
PDGFB-202ENST00000381551 ELF5Q9UKW6 265 aaPredicted RBP12.68□□□□□ -0.38
PDGFB-202ENST00000381551 TRAPPC2LQ9UL33 140 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 HIVEP2P31629 2446 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 NPIPB11E5RHQ5 1161 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 C15orf65H3BRN8 121 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 ORC5O43913 435 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 MELTFP08582 738 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 GLP1RP43220 463 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 DLX1P56177 255 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 PNLIPRP3Q17RR3 467 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 HACD4Q5VWC8 232 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 ZNF880Q6PDB4 577 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 VMO1Q7Z5L0 202 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 MMP27Q9H306 513 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 AUNIPQ9H7T9 357 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 SIRT7Q9NRC8 400 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 A3GALT2U3KPV4 340 aa12.67□□□□□ -0.38
PDGFB-202ENST00000381551 SONP18583 2426 aaKnown RBP12.66□□□□□ -0.38
PDGFB-202ENST00000381551 TMEM235A6NFC5 223 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 C12orf77C9JDV5 145 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 RGS5O15539 181 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 MMP23AO75900 390 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 CD3GP09693 182 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 IGHV1-8P0DP01 117 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 ARFRP1Q13795 201 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 KLF17Q5JT82 389 aaPredicted RBP12.66□□□□□ -0.38
PDGFB-202ENST00000381551 TMEM69Q5SWH9 247 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 C6orf183Q5T699 404 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 HEPN1Q6WQI6 88 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 IZUMO1Q8IYV9 350 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 RFESDQ8TAC1 157 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 NANPQ8TBE9 248 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 ARL11Q969Q4 196 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 C6orf62Q9GZU0 229 aaPredicted RBP12.66□□□□□ -0.38
PDGFB-202ENST00000381551 CHMP1AQ9HD42 196 aaPredicted RBP12.66□□□□□ -0.38
PDGFB-202ENST00000381551 Q9N2K0 584 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 C12orf4Q9NQ89 552 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 CALYQ9NYX4 217 aa12.66□□□□□ -0.38
PDGFB-202ENST00000381551 CENPVL3A0A0U1RRI6 287 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 FAM25AB3EWG3 89 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 FAM25CB3EWG5 89 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 FAM25GB3EWG6 89 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 INAFM1C9JVW0 142 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 FSHBP01225 129 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 HLA-DQB1P01920 261 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 OMGP23515 440 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 SSTR5P35346 364 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 GDNFP39905 211 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 TAS2R20P59543 309 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 MRPS15P82914 257 aaKnown RBP12.65□□□□□ -0.38
PDGFB-202ENST00000381551 PRB3Q04118 309 aaPredicted RBP12.65□□□□□ -0.38
PDGFB-202ENST00000381551 HCP5Q6MZN7 132 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 TRAT1Q6PIZ9 186 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 C5orf24Q7Z6I8 188 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 ZNF554Q86TJ5 538 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 LAX1Q8IWV1 398 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 TEX29Q8N6K0 151 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 OR10A7Q8NGE5 316 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 LHX4Q969G2 390 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 TAF9BQ9HBM6 251 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 KCNIP1Q9NZI2 227 aa12.65□□□□□ -0.38
PDGFB-202ENST00000381551 RNASEK-C17orf49H0YIS7 233 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 SSX5O60225 188 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 CLPXO76031 633 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 IGHV4-38-2P0DP08 117 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 PTHLHP12272 177 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 TALDO1P37837 337 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 MNDAP41218 407 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 PITPNAQ00169 270 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 PRAMEF5Q5TYX0 476 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 NCR3LG1Q68D85 454 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 ZNF782Q6ZMW2 699 aaPredicted RBP12.64□□□□□ -0.39
PDGFB-202ENST00000381551 IL17RELQ6ZVW7 336 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 SETD6Q8TBK2 473 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 KIRREL1Q96J84 757 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 BEX2Q9BXY8 128 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 HEXA-AS1Q9H8Q6 139 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 IDI2-AS1Q9NZ38 188 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 ZNF230Q9UIE0 474 aaPredicted RBP12.64□□□□□ -0.39
PDGFB-202ENST00000381551 MRPS7Q9Y2R9 242 aaKnown RBP12.64□□□□□ -0.39
PDGFB-202ENST00000381551 SESN1Q9Y6P5 492 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 MTORP42345 2549 aa12.64□□□□□ -0.39
PDGFB-202ENST00000381551 F2RL2O00254 374 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 TPPPO94811 219 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 HBZP02008 142 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 FCGR3AP08637 254 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 HNF1AP20823 631 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 FPR2P25090 351 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 TNFSF8P32971 234 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 GNG2P59768 71 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 HMGN3Q15651 99 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms