RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 OCMP0CE72 109 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-203ENST00000380748 UBCP0CG48 685 aaKnown RBP13.29□□□□□ -0.28
HMGN1-203ENST00000380748 ZNF20P17024 532 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 CNTFRP26992 372 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 AADACL4Q5VUY2 407 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 SAXO1Q8IYX7 474 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 LINC00311Q8N616 119 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 UBALD1Q8TB05 177 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 NR1H4Q96RI1 486 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-203ENST00000380748 MBOAT4Q96T53 435 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 RSRP1Q9BUV0 290 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 BARHL1Q9BZE3 327 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 STUB1Q9UNE7 303 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 MRPS28Q9Y2Q9 187 aaKnown RBP13.29□□□□□ -0.28
HMGN1-203ENST00000380748 A0A1W2PQL4 384 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-203ENST00000380748 SLC25A17O43808 307 aa13.28□□□□□ -0.28
HMGN1-203ENST00000380748 RAP2AP10114 183 aa13.28□□□□□ -0.28
HMGN1-203ENST00000380748 MMDQ15546 238 aa13.28□□□□□ -0.28
HMGN1-203ENST00000380748 DHFR2Q86XF0 187 aa13.28□□□□□ -0.28
HMGN1-203ENST00000380748 MINDY2Q8NBR6 621 aa13.28□□□□□ -0.28
HMGN1-203ENST00000380748 CNIH3Q8TBE1 160 aa13.28□□□□□ -0.28
HMGN1-203ENST00000380748 ELAC2Q9BQ52 826 aaKnown RBP13.28□□□□□ -0.28
HMGN1-203ENST00000380748 ARL8BQ9NVJ2 186 aa13.28□□□□□ -0.28
HMGN1-203ENST00000380748 IGHV7-81A0A0B4J1V7 117 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 IGHV3-43A0A0B4J1X8 118 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 SDCBPO00560 298 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-203ENST00000380748 SLC31A2O15432 143 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 SOX15O60248 233 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 APOL3O95236 402 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 IGHV3-43DP0DP04 118 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 IL3RAP26951 378 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 BLVRBP30043 206 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-203ENST00000380748 CRISP1P54107 249 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 MS4A2Q01362 244 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 PAX5Q02548 391 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 ANKRD13BQ86YJ7 626 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 OR13C9Q8NGT0 318 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 OR10AC1Q8NH08 325 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 UTP4Q969X6 686 aaKnown RBP13.27□□□□□ -0.29
HMGN1-203ENST00000380748 RNF166Q96A37 237 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-203ENST00000380748 TMED9Q9BVK6 235 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 HIPK2Q9H2X6 1198 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 TUBA4BQ9H853 241 aa13.27□□□□□ -0.29
HMGN1-203ENST00000380748 H2AFY2Q9P0M6 372 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-203ENST00000380748 GNGT2O14610 69 aa13.26□□□□□ -0.29
HMGN1-203ENST00000380748 IGHV3-11P01762 117 aa13.26□□□□□ -0.29
HMGN1-203ENST00000380748 MT-ND2P03891 347 aa13.26□□□□□ -0.29
HMGN1-203ENST00000380748 TMEM225BP0DP42 221 aa13.26□□□□□ -0.29
HMGN1-203ENST00000380748 VHLP40337 213 aa13.26□□□□□ -0.29
HMGN1-203ENST00000380748 ECSCRQ19T08 205 aa13.26□□□□□ -0.29
HMGN1-203ENST00000380748 NXNL2Q5VZ03 156 aa13.26□□□□□ -0.29
HMGN1-203ENST00000380748 C8orf31Q8N9H6 132 aa13.26□□□□□ -0.29
HMGN1-203ENST00000380748 ELOVL1Q9BW60 279 aa13.26□□□□□ -0.29
HMGN1-203ENST00000380748 FAM118AQ9NWS6 357 aa13.26□□□□□ -0.29
HMGN1-203ENST00000380748 GFOD1Q9NXC2 390 aa13.26□□□□□ -0.29
HMGN1-203ENST00000380748 ZNF581Q9P0T4 197 aa13.26□□□□□ -0.29
HMGN1-203ENST00000380748 TAGLN3Q9UI15 199 aa13.26□□□□□ -0.29
HMGN1-203ENST00000380748 A0A1W2PN81 502 aa13.25□□□□□ -0.29
HMGN1-203ENST00000380748 C15orf65H3BRN8 121 aa13.25□□□□□ -0.29
HMGN1-203ENST00000380748 SULT1C4O75897 302 aa13.25□□□□□ -0.29
HMGN1-203ENST00000380748 HLA-DRB1P01911 266 aa13.25□□□□□ -0.29
HMGN1-203ENST00000380748 ANXA8P13928 327 aa13.25□□□□□ -0.29
HMGN1-203ENST00000380748 CHRNA7P36544 502 aa13.25□□□□□ -0.29
HMGN1-203ENST00000380748 PTGES3Q15185 160 aaKnown RBP13.25□□□□□ -0.29
HMGN1-203ENST00000380748 C19orf54Q5BKX5 351 aa13.25□□□□□ -0.29
HMGN1-203ENST00000380748 TMEM244Q5VVB8 128 aa13.25□□□□□ -0.29
HMGN1-203ENST00000380748 SATL1Q86VE3 508 aa13.25□□□□□ -0.29
HMGN1-203ENST00000380748 TCEANCQ8N8B7 351 aa13.25□□□□□ -0.29
HMGN1-203ENST00000380748 OR52M1Q8NGK5 317 aa13.25□□□□□ -0.29
HMGN1-203ENST00000380748 RITA1Q96K30 269 aa13.25□□□□□ -0.29
HMGN1-203ENST00000380748 FBXO7Q9Y3I1 522 aa13.25□□□□□ -0.29
HMGN1-203ENST00000380748 TXNL1O43396 289 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 HSPB1P04792 205 aaKnown RBP13.24□□□□□ -0.29
HMGN1-203ENST00000380748 DBTP11182 482 aaKnown RBP13.24□□□□□ -0.29
HMGN1-203ENST00000380748 ZNF137PP52743 207 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 NDPQ00604 133 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 LSAMPQ13449 338 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 ZSCAN26Q16670 478 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 PIGYQ3MUY2 71 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 TP53I3Q53FA7 332 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 RNLSQ5VYX0 342 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 SLC25A48Q6ZT89 311 aaKnown RBP13.24□□□□□ -0.29
HMGN1-203ENST00000380748 ADGRG5Q8IZF4 528 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 OR10H4Q8NGA5 316 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 OR51A4Q8NGJ6 313 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 ARL11Q969Q4 196 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 FLYWCH2Q96CP2 140 aaKnown RBP13.24□□□□□ -0.29
HMGN1-203ENST00000380748 THAP7Q9BT49 309 aaPredicted RBP13.24□□□□□ -0.29
HMGN1-203ENST00000380748 ANKRD60Q9BZ19 345 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 NDE1Q9NXR1 346 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 GNG8Q9UK08 70 aa13.24□□□□□ -0.29
HMGN1-203ENST00000380748 OR2T7P0C7T2 308 aa13.23□□□□□ -0.29
HMGN1-203ENST00000380748 GZMHP20718 246 aa13.23□□□□□ -0.29
HMGN1-203ENST00000380748 KCNJ3P48549 501 aa13.23□□□□□ -0.29
HMGN1-203ENST00000380748 ACTBP60709 375 aa13.23□□□□□ -0.29
HMGN1-203ENST00000380748 EFNB1P98172 346 aa13.23□□□□□ -0.29
HMGN1-203ENST00000380748 TRIM25Q14258 630 aaKnown RBP13.23□□□□□ -0.29
HMGN1-203ENST00000380748 OR2G2Q8NGZ5 317 aa13.23□□□□□ -0.29
HMGN1-203ENST00000380748 TMEM163Q8TC26 289 aa13.23□□□□□ -0.29
HMGN1-203ENST00000380748 IL4I1Q96RQ9 567 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms