RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 RPL31P62899 125 aaKnown RBP10.93□□□□□ -0.66
CHD3-203ENST00000380358 OR2W3Q7Z3T1 314 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 WDFY1Q8IWB7 410 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 PP6455Q8WZ26 134 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 MED30Q96HR3 178 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 RAX2Q96IS3 184 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 SLC25A19Q9HC21 320 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 SVILO95425 2214 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 ADAP1O75689 374 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 DDOSTP39656 456 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 LRRC75BQ2VPJ9 315 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 CLEC18BQ6UXF7 455 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 SLC16A13Q7RTY0 426 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 HSPB8Q9UJY1 196 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 RGPD8O14715 1765 aaPredicted RBP10.93□□□□□ -0.66
CHD3-203ENST00000380358 TSPAN2O60636 221 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 ARF6P62330 175 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 OR52M1Q8NGK5 317 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 OR10G8Q8NGN5 311 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 PGLYRP4Q96LB8 373 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 TSPAN32Q96QS1 320 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 TMEM129A0AVI4 362 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 TMEM189A5PLL7 270 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 SIAH2O43255 324 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 ZNF658BQ4V348 819 aaPredicted RBP10.93□□□□□ -0.66
CHD3-203ENST00000380358 GAPTQ8N292 157 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 OR8B12Q8NGG6 310 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 HIST1H4GQ99525 98 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 SLC25A33Q9BSK2 321 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 hCG_38984A0A1B0GV85 526 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 C7orf71A4D174 169 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 LGALS3P17931 250 aaKnown RBP10.92□□□□□ -0.66
CHD3-203ENST00000380358 GPX2P18283 190 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 HDHD3Q9BSH5 251 aaPredicted RBP10.92□□□□□ -0.66
CHD3-203ENST00000380358 MUC21A0A0G2JKD1 596 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 MUC21A0A140T8X8 626 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 SAA1P0DJI8 122 aaPredicted RBP10.92□□□□□ -0.66
CHD3-203ENST00000380358 MUC21Q5SSG8 566 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 OR4A5Q8NH83 315 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 GEMIN7Q9H840 131 aaKnown RBP10.92□□□□□ -0.66
CHD3-203ENST00000380358 CCL28Q9NRJ3 127 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 DNAJB12Q9NXW2 375 aaKnown RBP10.92□□□□□ -0.66
CHD3-203ENST00000380358 C9orf170A2RU37 121 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 LMX1BO60663 402 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 CYB5R3P00387 301 aaPredicted RBP10.92□□□□□ -0.66
CHD3-203ENST00000380358 MVB12AQ96EY5 273 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 DUSP21Q9H596 190 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 ACAA1P09110 424 aaPredicted RBP10.92□□□□□ -0.66
CHD3-203ENST00000380358 COL9A1P20849 921 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 PNLIPRP3Q17RR3 467 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 TMEM95Q3KNT9 176 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 CARFQ8N187 725 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 CHD2O14647 1828 aaKnown RBP10.92□□□□□ -0.66
CHD3-203ENST00000380358 BTG1P62324 171 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 FHL5Q5TD97 284 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 UBE2DNLQ8IWF7 75 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 STAG3L2P0CL84 134 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 MDH2P40926 338 aaKnown RBP10.92□□□□□ -0.66
CHD3-203ENST00000380358 DPTQ07507 201 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 NSUN5P1Q3KNT7 163 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 KCNK17Q96T54 332 aa10.92□□□□□ -0.66
CHD3-203ENST00000380358 IGHV3OR16-8A0A075B7F1 116 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 TCF21O43680 179 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 GAPDHP04406 335 aaKnown RBP10.91□□□□□ -0.66
CHD3-203ENST00000380358 RAB40CQ96S21 281 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 WNT5BQ9H1J7 359 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 ZAR1LA6NP61 321 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 OR2C3Q8N628 320 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 SPSB1Q96BD6 273 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 ABHD14BQ96IU4 210 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 PRSS27Q9BQR3 290 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 YAE1D1Q9NRH1 226 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 IGHV1OR15-9A0A0B4J2B8 117 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 J3QR06 171 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 DXOO77932 396 aaKnown RBP10.91□□□□□ -0.66
CHD3-203ENST00000380358 MDP1Q86V88 176 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 IGHV1OR21-1A0A087WYE8 117 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 HSPB1P04792 205 aaKnown RBP10.91□□□□□ -0.66
CHD3-203ENST00000380358 PSG2P11465 335 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 ZNF343Q6P1L6 599 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 ASCL5Q7RTU5 278 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 SPICQ8N5J4 248 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 ATG101Q9BSB4 218 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 CISD1Q9NZ45 108 aaKnown RBP10.91□□□□□ -0.66
CHD3-203ENST00000380358 PPIAL4EA0A075B759 164 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 TRAV12-3A0A0B4J271 114 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 PPIAL4DF5H284 164 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 GPX1P07203 203 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 FAM106CPP0CH98 169 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 PPIAL4FP0DN26 164 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 CKS2P33552 79 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 ACVR1Q04771 509 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 EID2BQ96D98 161 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 CACFD1Q9UGQ2 172 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 FOXJ3Q9UPW0 622 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 PPIAL4AQ9Y536 164 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 DLG5Q8TDM6 1919 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 ZFP36L2P47974 494 aaKnown RBP10.91□□□□□ -0.66
CHD3-203ENST00000380358 MGAT2Q10469 447 aa10.91□□□□□ -0.66
CHD3-203ENST00000380358 SOCS1O15524 211 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms