RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SNRNP200O75643 2136 aaKnown RBP10.07□□□□□ -0.8
PTCH1-203ENST00000375274 OR5H1A6NKK0 313 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 CD74P04233 296 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 RBM11P57052 281 aaKnown RBP10.07□□□□□ -0.8
PTCH1-203ENST00000375274 ZNF766Q5HY98 468 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 ZNF383Q8NA42 475 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 MRPL30Q8TCC3 161 aaKnown RBP10.07□□□□□ -0.8
PTCH1-203ENST00000375274 ZNF501Q96CX3 271 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-203ENST00000375274 C5orf66Q9H5L9 145 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 RBBP6Q7Z6E9 1792 aaKnown RBP10.07□□□□□ -0.8
PTCH1-203ENST00000375274 TRAV17A0A0B4J275 112 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 A0A0J9YW62 118 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 SERTM2A0A1B0GWG4 89 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 CLEC3BP05452 202 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 PMELP40967 661 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 LYRM2Q9NU23 88 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-203ENST00000375274 FZR1Q9UM11 496 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 FUT9Q9Y231 359 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 RRP8O43159 456 aaKnown RBP10.06□□□□□ -0.8
PTCH1-203ENST00000375274 CA11O75493 328 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 CTSBP07858 339 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 F2RP25116 425 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 CCKARP32238 428 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 GNG10P50151 68 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 RAB7AP51149 207 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-203ENST00000375274 H1FOOQ8IZA3 346 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-203ENST00000375274 LINC00518Q8N0U6 118 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 SH2D2AQ9NP31 389 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 SLC2A8Q9NY64 477 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 LOC102723971A0A1B0GUV8 181 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 MS4A18H0YCH9 400 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 PAGE4O60829 102 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 PITX3O75364 302 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 RECKO95980 971 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 CD8AP01732 235 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 TNFRSF1AP19438 455 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 ARL16Q0P5N6 197 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 MS4A18Q3C1V0 323 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 BTNL3Q6UXE8 466 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 OR4A4PQ8NGN8 299 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 ZNF519Q8TB69 540 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 MSL2Q9HCI7 577 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 TCFL5Q9UL49 500 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 KIF26BQ2KJY2 2108 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 M0R143 59 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 ADRA2AP08913 450 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 PSG2P11465 335 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 EGR4Q05215 589 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 VMA21Q3ZAQ7 101 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 SLC36A1Q7Z2H8 476 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 TCTEX1D1Q8N7M0 179 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 R3HDM4Q96D70 268 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 CFHR5Q9BXR6 569 aa10.06□□□□□ -0.8
PTCH1-203ENST00000375274 CTXND1A0A1B0GTU2 59 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 SLC31A2O15432 143 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 TBX6O95947 436 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-203ENST00000375274 PGA4P0DJD7 388 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 HKR1P10072 659 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 ADIPOR1Q96A54 375 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 TIMD4Q96H15 378 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 FAM206AQ9NX38 181 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 LHFPL6Q9Y693 200 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 TRAV34A0A0B4J273 112 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 IL9P15248 144 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 OPRK1P41145 380 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 SERF2P84101 59 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 EIF3IQ13347 325 aaKnown RBP10.05□□□□□ -0.8
PTCH1-203ENST00000375274 DEFB109BQ30KR1 87 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 OR1K1Q8NGR3 316 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 IL36GQ9NZH8 169 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 BCL2P10415 239 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 PRF1P14222 555 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 FCER1GP30273 86 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 ZNF83P51522 516 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 DHRS13Q6UX07 377 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 OR4S2Q8NH73 311 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 SOSTQ9BQB4 213 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 G6PC2Q9NQR9 355 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 GATCO43716 136 aaKnown RBP10.05□□□□□ -0.8
PTCH1-203ENST00000375274 ZNF253O75346 499 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 WDR73Q6P4I2 378 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 SLC25A47Q6Q0C1 308 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 NDFIP1Q9BT67 221 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 PIPOXQ9P0Z9 390 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 TINAGQ9UJW2 476 aa10.05□□□□□ -0.8
PTCH1-203ENST00000375274 IGHV5-10-1A0A0J9YXX1 117 aa10.04□□□□□ -0.8
PTCH1-203ENST00000375274 TMEM14DPA8MWL7 114 aa10.04□□□□□ -0.8
PTCH1-203ENST00000375274 C3orf80F5H4A9 247 aa10.04□□□□□ -0.8
PTCH1-203ENST00000375274 RPS11P62280 158 aaKnown RBP eCLIP10.04□□□□□ -0.8
PTCH1-203ENST00000375274 RNASEKQ6P5S7 137 aaKnown RBP10.04□□□□□ -0.8
PTCH1-203ENST00000375274 TMEM230Q96A57 120 aa10.04□□□□□ -0.8
PTCH1-203ENST00000375274 OR6C3Q9NZP0 311 aa10.04□□□□□ -0.8
PTCH1-203ENST00000375274 HSF4Q9ULV5 492 aa10.04□□□□□ -0.8
PTCH1-203ENST00000375274 OOEPA6NGQ2 149 aa10.04□□□□□ -0.8
PTCH1-203ENST00000375274 MPTX1A8MV57 137 aa10.04□□□□□ -0.8
PTCH1-203ENST00000375274 RPEL1Q2QD12 228 aa10.04□□□□□ -0.8
PTCH1-203ENST00000375274 OR10AD1Q8NGE0 317 aa10.04□□□□□ -0.8
PTCH1-203ENST00000375274 TMEM222Q9H0R3 208 aa10.04□□□□□ -0.8
PTCH1-203ENST00000375274 BARX1Q9HBU1 254 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms