RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 ZNF565Q8N9K5 539 aa15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 OR10J5Q8NHC4 309 aa15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 MSI2Q96DH6 328 aaKnown RBP15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 C18orf12Q96KH6 178 aa15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 SEBOXQ9HB31 216 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 PLCE1Q9P212 2302 aa15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 IGKV1D-13A0A0B4J2D9 117 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 LINC00862A6NCI5 91 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 ZSCAN5BA6NJL1 495 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 H0YIZ8 118 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 IGKV1-13P0DP09 117 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 ATXN7L3Q14CW9 347 aaPredicted RBP15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 GGNBP1Q5YKI7 109 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 FAM90A1Q86YD7 464 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 LGI3Q8N145 548 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 INO80EQ8NBZ0 244 aaPredicted RBP15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 GLYATL2Q8WU03 294 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 MRPL24Q96A35 216 aaKnown RBP15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 KIRREL1Q96J84 757 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 DMRTA2Q96SC8 542 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 SLC5A7Q9GZV3 580 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 UFSP2Q9NUQ7 469 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 OR14J1Q9UGF5 321 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 OR2W1Q9Y3N9 320 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 ZFYVE26Q68DK2 2539 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 KIAA2026Q5HYC2 2103 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 KANTRA0A1W2PQU2 76 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 TMEM30CPA0ZSE6 113 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 SRRM5B3KS81 715 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 PSPNO60542 156 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 AP2S1P53680 142 aaPredicted RBP15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 UBA52P62987 128 aaKnown RBP15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 PAX5Q02548 391 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 IAH1Q2TAA2 248 aaPredicted RBP15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 SLC35E4Q6ICL7 350 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 TMEM108Q6UXF1 575 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 LRRC29Q8WV35 223 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 SECTM1Q8WVN6 248 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 VKORC1Q9BQB6 163 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 GSX2Q9BZM3 304 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 FBXO9Q9UK97 447 aaPredicted RBP15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 TRAPPC2LQ9UL33 140 aa15.16■□□□□ 0.02
HLA-DQB1-201ENST00000374943 PKD1L2Q7Z442 2459 aa15.15■□□□□ 0.02
HLA-DQB1-201ENST00000374943 C3orf85A0A1B0GTC6 90 aa15.15■□□□□ 0.02
HLA-DQB1-201ENST00000374943 hCG_1807616A0A1W2PRN6 198 aa15.15■□□□□ 0.02
HLA-DQB1-201ENST00000374943 PTAFRP25105 342 aa15.15■□□□□ 0.02
HLA-DQB1-201ENST00000374943 CEBPDP49716 269 aaPredicted RBP15.15■□□□□ 0.02
HLA-DQB1-201ENST00000374943 SP6Q3SY56 376 aa15.15■□□□□ 0.02
HLA-DQB1-201ENST00000374943 ZNF818PQ6ZRF7 136 aa15.15■□□□□ 0.02
HLA-DQB1-201ENST00000374943 SCARB1Q8WTV0 552 aa15.15■□□□□ 0.02
HLA-DQB1-201ENST00000374943 DCUN1D4Q92564 292 aa15.15■□□□□ 0.02
HLA-DQB1-201ENST00000374943 MEGF10Q96KG7 1140 aa15.15■□□□□ 0.02
HLA-DQB1-201ENST00000374943 SH3BGRL2Q9UJC5 107 aa15.15■□□□□ 0.02
HLA-DQB1-201ENST00000374943 AUP1Q9Y679 476 aa15.15■□□□□ 0.02
HLA-DQB1-201ENST00000374943 PCNX1Q96RV3 2341 aa15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 ZZEF1O43149 2961 aa15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 PHF1O43189 567 aaPredicted RBP15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 WNT2P09544 360 aa15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 GATA4P43694 442 aa15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 SELENOVP59797 346 aa15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 RAB32Q13637 225 aa15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 ESCO2Q56NI9 601 aa15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 TBC1D26Q86UD7 250 aa15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 LILRB1Q8NHL6 650 aaPredicted RBP15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 RND1Q92730 232 aa15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 TP53RKQ96S44 253 aa15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 MRPL37Q9BZE1 423 aaKnown RBP15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 TMEM222Q9H0R3 208 aa15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 DNAJB11Q9UBS4 358 aa15.14■□□□□ 0.01
HLA-DQB1-201ENST00000374943 OR3A1P47881 315 aa15.13■□□□□ 0.01
HLA-DQB1-201ENST00000374943 RAB14P61106 215 aa15.13■□□□□ 0.01
HLA-DQB1-201ENST00000374943 KLRB1Q12918 225 aa15.13■□□□□ 0.01
HLA-DQB1-201ENST00000374943 VHLLQ6RSH7 139 aa15.13■□□□□ 0.01
HLA-DQB1-201ENST00000374943 CMTM1Q8IZ96 169 aa15.13■□□□□ 0.01
HLA-DQB1-201ENST00000374943 BVESQ8NE79 360 aa15.13■□□□□ 0.01
HLA-DQB1-201ENST00000374943 TMEM56Q96MV1 263 aa15.13■□□□□ 0.01
HLA-DQB1-201ENST00000374943 OR2V2Q96R30 315 aa15.13■□□□□ 0.01
HLA-DQB1-201ENST00000374943 KIF25Q9UIL4 384 aa15.13■□□□□ 0.01
HLA-DQB1-201ENST00000374943 TMED3Q9Y3Q3 217 aa15.13■□□□□ 0.01
HLA-DQB1-201ENST00000374943 TMEM56-RWDD3S4R434 201 aa15.13■□□□□ 0.01
HLA-DQB1-201ENST00000374943 THBDP07204 575 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 LHFPL5Q8TAF8 219 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 ST8SIA2Q92186 375 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 AQP10Q96PS8 301 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 CCL28Q9NRJ3 127 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 OR5AC2Q9NZP5 309 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 GSKIPQ9P0R6 139 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 OR1A1Q9P1Q5 309 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 DUXBA0A1W2PPF3 345 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 EGR1P18146 543 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 COL10A1Q03692 680 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 TESK1Q15569 626 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 LYZL2Q7Z4W2 148 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 OR10V1Q8NGI7 309 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 RRNAD1Q96FB5 475 aaKnown RBP15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 ARPC5LQ9BPX5 153 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 TAF9BQ9HBM6 251 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 KCNIP1Q9NZI2 227 aa15.12■□□□□ 0.01
HLA-DQB1-201ENST00000374943 TRAV39A0A0B4J263 110 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms