RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 PCBD1P61457 104 aa17.36■□□□□ 0.37
CBWD3-201ENST00000360171 HERV-K104P61576 105 aa17.36■□□□□ 0.37
CBWD3-201ENST00000360171 RAB1AP62820 205 aa17.36■□□□□ 0.37
CBWD3-201ENST00000360171 FOXF2Q12947 444 aa17.36■□□□□ 0.37
CBWD3-201ENST00000360171 PIGYQ3MUY2 71 aa17.36■□□□□ 0.37
CBWD3-201ENST00000360171 Q6ZS49 121 aa17.36■□□□□ 0.37
CBWD3-201ENST00000360171 OR5L1Q8NGL2 311 aa17.36■□□□□ 0.37
CBWD3-201ENST00000360171 ABHD14BQ96IU4 210 aa17.36■□□□□ 0.37
CBWD3-201ENST00000360171 PARP12Q9H0J9 701 aaKnown RBP17.36■□□□□ 0.37
CBWD3-201ENST00000360171 S100A6P06703 90 aa17.35■□□□□ 0.37
CBWD3-201ENST00000360171 SNRNP70P08621 437 aaKnown RBP17.35■□□□□ 0.37
CBWD3-201ENST00000360171 KIR2DL2P43627 348 aaPredicted RBP17.35■□□□□ 0.37
CBWD3-201ENST00000360171 HTR5AP47898 357 aa17.35■□□□□ 0.37
CBWD3-201ENST00000360171 RBM11P57052 281 aaKnown RBP17.35■□□□□ 0.37
CBWD3-201ENST00000360171 CLEC9AQ6UXN8 241 aa17.35■□□□□ 0.37
CBWD3-201ENST00000360171 CISD2Q8N5K1 135 aaKnown RBP17.35■□□□□ 0.37
CBWD3-201ENST00000360171 CNEP1R1Q8N9A8 125 aa17.35■□□□□ 0.37
CBWD3-201ENST00000360171 BOD1Q96IK1 185 aa17.35■□□□□ 0.37
CBWD3-201ENST00000360171 METTL1Q9UBP6 276 aaKnown RBP17.35■□□□□ 0.37
CBWD3-201ENST00000360171 RCL1Q9Y2P8 373 aaKnown RBP17.35■□□□□ 0.37
CBWD3-201ENST00000360171 SHANK1Q9Y566 2161 aa17.35■□□□□ 0.37
CBWD3-201ENST00000360171 HLA-HP01893 362 aa17.35■□□□□ 0.37
CBWD3-201ENST00000360171 PRH1P02810 166 aa17.35■□□□□ 0.37
CBWD3-201ENST00000360171 MAS1LP35410 378 aa17.35■□□□□ 0.37
CBWD3-201ENST00000360171 TDGF1P3P51864 188 aa17.35■□□□□ 0.37
CBWD3-201ENST00000360171 ZNF266Q14584 549 aa17.35■□□□□ 0.37
CBWD3-201ENST00000360171 SRSF7Q16629 238 aaKnown RBP eCLIP17.35■□□□□ 0.37
CBWD3-201ENST00000360171 VWA1Q6PCB0 445 aa17.35■□□□□ 0.37
CBWD3-201ENST00000360171 TCEAL7Q9BRU2 100 aa17.35■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A10PA6NDY2 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A18PA6NE21 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A16PA6NEW6 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A20PA6NIJ5 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A8PA6NJQ4 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A7PA6NKC0 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A22PA8MWA6 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A12PA8MX19 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A5PA8MXJ8 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A23PA8MXZ1 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 UMAD1C9J7I0 102 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 PHF1O43189 567 aaPredicted RBP17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A15PP0C7V4 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A13PP0C7W8 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A14PP0C7W9 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM90A24PP0C7X0 464 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 DSPP15924 2871 aaKnown RBP17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FUT3P21217 361 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 EWSR1Q01844 656 aaKnown RBP eCLIP17.34■□□□□ 0.37
CBWD3-201ENST00000360171 NHLH2Q02577 135 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 AKIRIN2Q53H80 203 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 RPRMLQ8N4K4 120 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 SLC35G3Q8N808 338 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 CPEB3Q8NE35 698 aaKnown RBP17.34■□□□□ 0.37
CBWD3-201ENST00000360171 Q8NFD4 153 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 OR1K1Q8NGR3 316 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 LILRB1Q8NHL6 650 aaPredicted RBP17.34■□□□□ 0.37
CBWD3-201ENST00000360171 KCNJ16Q9NPI9 418 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 FAM215AQ9Y5M1 114 aa17.34■□□□□ 0.37
CBWD3-201ENST00000360171 PPYP01298 95 aa17.33■□□□□ 0.37
CBWD3-201ENST00000360171 KRTCAP3Q53RY4 240 aa17.33■□□□□ 0.37
CBWD3-201ENST00000360171 DYRK2Q92630 601 aa17.33■□□□□ 0.37
CBWD3-201ENST00000360171 SPIN2AQ99865 258 aa17.33■□□□□ 0.37
CBWD3-201ENST00000360171 SPIN2BQ9BPZ2 258 aa17.33■□□□□ 0.37
CBWD3-201ENST00000360171 SH3BGRL3Q9H299 93 aa17.33■□□□□ 0.37
CBWD3-201ENST00000360171 TLN1Q9Y490 2541 aaKnown RBP17.33■□□□□ 0.36
CBWD3-201ENST00000360171 ZNF816-ZNF321PA0A0X1KG74 233 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 MBD3L4A6NDZ8 208 aaPredicted RBP17.33■□□□□ 0.36
CBWD3-201ENST00000360171 MBD3L3A6NE82 208 aaPredicted RBP17.33■□□□□ 0.36
CBWD3-201ENST00000360171 MBD3L5A6NJ08 208 aaPredicted RBP17.33■□□□□ 0.36
CBWD3-201ENST00000360171 M0R036 132 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 MPPED1O15442 326 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 RAB5AP20339 215 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 AADACP22760 399 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 AKR1C3P42330 323 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 FHITP49789 147 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 RND3P61587 244 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 HIKESHIQ53FT3 197 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 UNQ6494/PRO21346Q6UXR6 183 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 OR2C3Q8N628 320 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 OR11L1Q8NGX0 322 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 MBD3L2Q8NHZ7 208 aaPredicted RBP17.33■□□□□ 0.36
CBWD3-201ENST00000360171 TMEM56Q96MV1 263 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 TP53RKQ96S44 253 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 TMEM222Q9H0R3 208 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 SEBOXQ9HB31 216 aaPredicted RBP17.33■□□□□ 0.36
CBWD3-201ENST00000360171 TMEM56-RWDD3S4R434 201 aa17.33■□□□□ 0.36
CBWD3-201ENST00000360171 MAP1BP46821 2468 aaKnown RBP17.33■□□□□ 0.36
CBWD3-201ENST00000360171 C3orf85A0A1B0GTC6 90 aa17.32■□□□□ 0.36
CBWD3-201ENST00000360171 TRDCB7Z8K6 153 aa17.32■□□□□ 0.36
CBWD3-201ENST00000360171 PITX3O75364 302 aa17.32■□□□□ 0.36
CBWD3-201ENST00000360171 ZNF205O95201 554 aa17.32■□□□□ 0.36
CBWD3-201ENST00000360171 S100A9P06702 114 aaKnown RBP17.32■□□□□ 0.36
CBWD3-201ENST00000360171 PRR30Q53SZ7 412 aaPredicted RBP17.32■□□□□ 0.36
CBWD3-201ENST00000360171 Q6ZPA2 131 aa17.32■□□□□ 0.36
CBWD3-201ENST00000360171 HSD17B11Q8NBQ5 300 aa17.32■□□□□ 0.36
CBWD3-201ENST00000360171 BCL2L2Q92843 193 aaPredicted RBP17.32■□□□□ 0.36
CBWD3-201ENST00000360171 SPSB4Q96A44 273 aa17.32■□□□□ 0.36
CBWD3-201ENST00000360171 ZGRF1Q86YA3 2104 aa17.32■□□□□ 0.36
CBWD3-201ENST00000360171 DUXBA0A1W2PPF3 345 aa17.32■□□□□ 0.36
CBWD3-201ENST00000360171 BTBD17A6NE02 478 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms