RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 EID2BQ96D98 161 aa16.11■□□□□ 0.17
SHANK1-202ENST00000359082 FAHD2AQ96GK7 314 aa16.11■□□□□ 0.17
SHANK1-202ENST00000359082 PCGF1Q9BSM1 259 aa16.11■□□□□ 0.17
SHANK1-202ENST00000359082 M0R3E3 92 aa16.11■□□□□ 0.17
SHANK1-202ENST00000359082 KCNAB3O43448 404 aa16.11■□□□□ 0.17
SHANK1-202ENST00000359082 PDE6DO43924 150 aa16.11■□□□□ 0.17
SHANK1-202ENST00000359082 LYZL2Q7Z4W2 148 aa16.11■□□□□ 0.17
SHANK1-202ENST00000359082 TMEM251Q8N6I4 163 aa16.11■□□□□ 0.17
SHANK1-202ENST00000359082 OR5AU1Q8NGC0 362 aa16.11■□□□□ 0.17
SHANK1-202ENST00000359082 CLN8Q9UBY8 286 aa16.11■□□□□ 0.17
SHANK1-202ENST00000359082 TRBV23-1A0A0A0MS06 115 aa16.1■□□□□ 0.17
SHANK1-202ENST00000359082 CORTO00230 105 aa16.1■□□□□ 0.17
SHANK1-202ENST00000359082 CBLN2Q8IUK8 224 aa16.1■□□□□ 0.17
SHANK1-202ENST00000359082 CXorf1O96002 111 aa16.1■□□□□ 0.17
SHANK1-202ENST00000359082 HMGA2P52926 109 aa16.1■□□□□ 0.17
SHANK1-202ENST00000359082 LSM6P62312 80 aaKnown RBP16.1■□□□□ 0.17
SHANK1-202ENST00000359082 LDLRAD3Q86YD5 345 aa16.1■□□□□ 0.17
SHANK1-202ENST00000359082 OR2Y1Q8NGV0 311 aa16.1■□□□□ 0.17
SHANK1-202ENST00000359082 APOBEC4Q8WW27 367 aaKnown RBP16.1■□□□□ 0.17
SHANK1-202ENST00000359082 CDK5RAP2Q96SN8 1893 aa16.1■□□□□ 0.17
SHANK1-202ENST00000359082 LEUTXA8MZ59 168 aa16.1■□□□□ 0.17
SHANK1-202ENST00000359082 M0R296 226 aa16.1■□□□□ 0.17
SHANK1-202ENST00000359082 SLC35E3Q7Z769 313 aa16.1■□□□□ 0.17
SHANK1-202ENST00000359082 HEXA-AS1Q9H8Q6 139 aa16.1■□□□□ 0.17
SHANK1-202ENST00000359082 DOCK1Q14185 1865 aa16.1■□□□□ 0.17
SHANK1-202ENST00000359082 LBHQ53QV2 105 aaPredicted RBP16.1■□□□□ 0.17
SHANK1-202ENST00000359082 WDR74Q6RFH5 385 aaPredicted RBP16.1■□□□□ 0.17
SHANK1-202ENST00000359082 ALG14Q96F25 216 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 RNF122Q9H9V4 155 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 V9GYH0 126 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 IGHV5-10-1A0A0J9YXX1 117 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 TRAF4Q9BUZ4 470 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-202ENST00000359082 FFAR1O14842 300 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 SNURFLB1AK76 121 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 SPANXN1Q5VSR9 72 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 NSUN5P2Q63ZY6 315 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 SLC25A42Q86VD7 318 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 ZNF383Q8NA42 475 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 HDHD3Q9BSH5 251 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-202ENST00000359082 ELOVL1Q9BW60 279 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 SLC25A10Q9UBX3 287 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-202ENST00000359082 C9orf172C9J069 976 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 RPL36A-HNRNPH2H7BZ11 118 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 PIPOXQ9P0Z9 390 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 HIGD1AQ9Y241 93 aa16.09■□□□□ 0.17
SHANK1-202ENST00000359082 PAPPAQ13219 1627 aa16.08■□□□□ 0.17
SHANK1-202ENST00000359082 CRHP06850 196 aa16.08■□□□□ 0.17
SHANK1-202ENST00000359082 PAFAH1B2P68402 229 aa16.08■□□□□ 0.17
SHANK1-202ENST00000359082 TBX15Q96SF7 602 aa16.08■□□□□ 0.17
SHANK1-202ENST00000359082 OR2W1Q9Y3N9 320 aa16.08■□□□□ 0.17
SHANK1-202ENST00000359082 CXCL3P19876 107 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 TFPI2P48307 235 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 CLPPQ16740 277 aaPredicted RBP16.08■□□□□ 0.16
SHANK1-202ENST00000359082 MDP1Q86V88 176 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 OR11H7Q8NGC8 314 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 ZNF552Q9H707 407 aaPredicted RBP16.08■□□□□ 0.16
SHANK1-202ENST00000359082 CES1P1Q9UKY3 287 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 USP54Q70EL1 1684 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 LILRA6Q6PI73 481 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 PET117Q6UWS5 81 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 CARFQ8N187 725 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 OR1N2Q8NGR9 330 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 C10orf35Q96D05 121 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 STARD4Q96DR4 205 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 OR2J1Q9GZK6 312 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 RCC2Q9P258 522 aaKnown RBP16.08■□□□□ 0.16
SHANK1-202ENST00000359082 SYNGR1O43759 233 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 LOXL3P58215 753 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 SURF2Q15527 256 aaPredicted RBP16.08■□□□□ 0.16
SHANK1-202ENST00000359082 C21orf62-AS1Q17RA5 79 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 BVESQ8NE79 360 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 ATG101Q9BSB4 218 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 PSG6Q00889 435 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 ZNF488Q96MN9 340 aa16.08■□□□□ 0.16
SHANK1-202ENST00000359082 GZMHP20718 246 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 CD300CQ08708 224 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 MGAT2Q10469 447 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 MMDQ15546 238 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 TMEM38BQ9NVV0 291 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 ISLRO14498 428 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 ACAA1P09110 424 aaPredicted RBP16.07■□□□□ 0.16
SHANK1-202ENST00000359082 SNRPCP09234 159 aaKnown RBP16.07■□□□□ 0.16
SHANK1-202ENST00000359082 TEPPQ6URK8 271 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 BPIFA4PQ86YQ2 179 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 ZNF441Q8N8Z8 693 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 OR4C12Q96R67 309 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 ZNHIT1O43257 154 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 KIR2DL1P43626 348 aaPredicted RBP16.07■□□□□ 0.16
SHANK1-202ENST00000359082 KIR2DL2P43627 348 aaPredicted RBP16.07■□□□□ 0.16
SHANK1-202ENST00000359082 ST6GAL2Q96JF0 529 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 TMEM210A6NLX4 147 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 H3BQ15 152 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 UBE2L6O14933 153 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 BGLAPP02818 100 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 BHLHA9Q7RTU4 235 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 A6NDN8 102 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 SMIM6P0DI80 62 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 VN1R17PQ8TDU5 208 aa16.07■□□□□ 0.16
SHANK1-202ENST00000359082 PPP1CCP36873 323 aaKnown RBP16.06■□□□□ 0.16
SHANK1-202ENST00000359082 STRCQ7RTU9 1775 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms