RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CEACAM16Q2WEN9 425 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 NMSQ5H8A3 153 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 GUSBP11Q6P575 273 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 C20orf204Q6ZNR8 217 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 LHFPL2Q6ZUX7 228 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 TMEM37Q8WXS4 190 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 ATP5SQ99766 215 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 RBKSQ9H477 322 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 A0A096LPE4 126 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 A0A0G2JMM0 328 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 A0A1W2PPB8 328 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 A0A1W2PPZ6 126 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 A0A1W2PRS3 328 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 KIR3DP1A8MWS1 328 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 ZIC3O60481 467 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 CYTIPO60759 359 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 PKIAP61925 76 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 ID3Q02535 119 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 COL10A1Q03692 680 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 EXT1Q16394 746 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 FAM27BQ5VT28 67 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 SLC35E3Q7Z769 313 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 ZNF295-AS1Q8N0V1 137 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 LILRB2Q8N423 598 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 GATAD1Q8WUU5 269 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 GPR146Q96CH1 333 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 GNPNAT1Q96EK6 184 aaPredicted RBP8.69□□□□□ -1.02
PTPRA-203ENST00000356147 ASPMQ8IZT6 3477 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 A0A1B0GU03 582 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 IFNA5P01569 189 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 VDAC1P21796 283 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 G0S2P27469 103 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 HIST1H3AP68431 136 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 ZNF664Q8N3J9 261 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 FADS6Q8N9I5 356 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 SPIN2AQ99865 258 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 SPIN2BQ9BPZ2 258 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 AHCTF1Q8WYP5 2266 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 ARGFXA6NJG6 315 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 BCAT2O15382 392 aaPredicted RBP8.68□□□□□ -1.02
PTPRA-203ENST00000356147 SLC31A2O15432 143 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 SOX15O60248 233 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 AMBPP02760 352 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 BCL2P10415 239 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 EDN3P14138 238 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 CASP6P55212 293 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 UCP3P55916 312 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 RAB35Q15286 201 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 SSX2Q16385 188 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 SYT13Q7L8C5 426 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 RCC1LQ96I51 464 aaKnown RBP8.68□□□□□ -1.02
PTPRA-203ENST00000356147 TMEM56Q96MV1 263 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 GPR87Q9BY21 358 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 Q9N2K0 584 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 CACNG5Q9UF02 275 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 WASF3Q9UPY6 502 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 TMEM56-RWDD3S4R434 201 aa8.68□□□□□ -1.02
PTPRA-203ENST00000356147 A0A1B0GUS0 222 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 A0A1W2PPQ1 181 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 ST8SIA5O15466 376 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 CXCL13O43927 109 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 GZMBP10144 247 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 GZMHP20718 246 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 FUT6P51993 359 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 LBX1P52954 281 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 Q3ZCU0 254 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 SPANXN5Q5MJ07 72 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 OR8G2PQ6IF36 304 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 C16orf82Q7Z2V1 217 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 OR56B2PQ8NGI1 322 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 SCGB1C1Q8TD33 95 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 RNF138Q8WVD3 245 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 RBMXL1Q96E39 390 aaKnown RBP8.67□□□□□ -1.02
PTPRA-203ENST00000356147 FGF23Q9GZV9 251 aaPredicted RBP8.67□□□□□ -1.02
PTPRA-203ENST00000356147 SMDT1Q9H4I9 107 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 SIRT7Q9NRC8 400 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 OCIAD1Q9NX40 245 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 PPP1R3CQ9UQK1 317 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 RNF115Q9Y4L5 304 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 IGLV3-32A0A0A0MS00 114 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 hCG_38984A0A1B0GV85 526 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 C9J4A7 227 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 RPL36A-HNRNPH2H7BZ11 118 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 PGLYRP1O75594 196 aaPredicted RBP8.67□□□□□ -1.02
PTPRA-203ENST00000356147 MLF1P58340 268 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 OR8G1Q15617 311 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 TMEM211Q6ICI0 200 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 ZDHHC23Q8IYP9 409 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 M1APQ8TC57 530 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 SGCZQ96LD1 299 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 SMIM7Q9BQ49 75 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 WNT5BQ9H1J7 359 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 TMEM38BQ9NVV0 291 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 ERRFI1Q9UJM3 462 aaPredicted RBP8.67□□□□□ -1.02
PTPRA-203ENST00000356147 RARRES3Q9UL19 164 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 IGLV3-12A0A075B6K2 115 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 A0A1W2PQM1 296 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 XKRY2A2RUG3 117 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 TP53I11O14683 189 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 EREGO14944 169 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms