RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 COMPP49747 757 aaPredicted RBP12.24□□□□□ -0.45
RLIM-202ENST00000349225 ENDOGQ14249 297 aaKnown RBP12.24□□□□□ -0.45
RLIM-202ENST00000349225 ACOT6Q3I5F7 207 aaPredicted RBP12.24□□□□□ -0.45
RLIM-202ENST00000349225 TOMM20LQ6UXN7 152 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 MRPL52Q86TS9 123 aaKnown RBP12.24□□□□□ -0.45
RLIM-202ENST00000349225 C11orf42Q8N5U0 333 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 PLA2G2FQ9BZM2 168 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 SLC7A10Q9NS82 523 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 ZFP30Q9Y2G7 519 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 UBE2J1Q9Y385 318 aaPredicted RBP12.24□□□□□ -0.45
RLIM-202ENST00000349225 FAM180AQ6UWF9 173 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 NUFIP2Q7Z417 695 aaKnown RBP12.24□□□□□ -0.45
RLIM-202ENST00000349225 SLC22A18ASQ8N1D0 253 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 MRGPRX4Q96LA9 322 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 ZNF286AQ9HBT8 521 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 CNTRLQ7Z7A1 2325 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 F5P12259 2224 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 GON4LQ3T8J9 2241 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 IGKV1D-13A0A0B4J2D9 117 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 CCDC85CA6NKD9 419 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 CCL25O15444 150 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 IGKV1-13P0DP09 117 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 KIR2DL1P43626 348 aaPredicted RBP12.24□□□□□ -0.45
RLIM-202ENST00000349225 MYBPHQ13203 477 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 RUNX3Q13761 415 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 SNAI3Q3KNW1 292 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 OR5B12Q96R08 314 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 FOXJ2Q9P0K8 574 aa12.24□□□□□ -0.45
RLIM-202ENST00000349225 TRAF3IP2O43734 574 aaPredicted RBP12.23□□□□□ -0.45
RLIM-202ENST00000349225 HNRNPA1P09651 372 aaKnown RBP eCLIP12.23□□□□□ -0.45
RLIM-202ENST00000349225 FOSL2P15408 326 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 MDH2P40926 338 aaKnown RBP12.23□□□□□ -0.45
RLIM-202ENST00000349225 RAB7AP51149 207 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 MEF2BQ02080 365 aaPredicted RBP12.23□□□□□ -0.45
RLIM-202ENST00000349225 TMEM196Q5HYL7 178 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 BATF2Q8N1L9 274 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 CISD2Q8N5K1 135 aaKnown RBP12.23□□□□□ -0.45
RLIM-202ENST00000349225 CCDC71LQ8N9Z2 235 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 OR51I2Q9H344 312 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 A0A1W2PR80 420 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 GRIFINA4D1Z8 144 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 MAP1LC3B2A6NCE7 125 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 TCF23Q7RTU1 214 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 CPEB3Q8NE35 698 aaKnown RBP12.23□□□□□ -0.45
RLIM-202ENST00000349225 MAP1LC3BQ9GZQ8 125 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 TMEM106BQ9NUM4 274 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 RALGAPA1Q6GYQ0 2036 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 EXPH5Q8NEV8 1989 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 ASCC3Q8N3C0 2202 aaKnown RBP12.23□□□□□ -0.45
RLIM-202ENST00000349225 SOX8P57073 446 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 HHEXQ03014 270 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 NOGQ13253 232 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 Q6ZVH6 145 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 MYPOPQ86VE0 399 aaPredicted RBP12.23□□□□□ -0.45
RLIM-202ENST00000349225 GAPTQ8N292 157 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 RPP25LQ8N5L8 163 aaKnown RBP12.23□□□□□ -0.45
RLIM-202ENST00000349225 MANBALQ9NQG1 85 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 WNT16Q9UBV4 365 aa12.23□□□□□ -0.45
RLIM-202ENST00000349225 FER1L5A0AVI2 2057 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 A0A1W2PNV4 684 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 PRDX4Q13162 271 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 C1orf61Q13536 156 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 Q6ZRM9 215 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 STPG4Q8N801 248 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 RBM24Q9BX46 236 aaKnown RBP12.22□□□□□ -0.45
RLIM-202ENST00000349225 NPPCP23582 126 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 HERV-K104P61576 105 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 HIST1H3AP68431 136 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 DLX2Q07687 328 aaPredicted RBP12.22□□□□□ -0.45
RLIM-202ENST00000349225 ZNF525Q8N782 197 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 ZNF441Q8N8Z8 693 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 OR1N1Q8NGS0 311 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 OR2AE1Q8NHA4 323 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 PP6455Q8WZ26 134 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 ZNF160Q9HCG1 818 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 PXMP4Q9Y6I8 212 aa12.22□□□□□ -0.45
RLIM-202ENST00000349225 CHRNB4P30926 498 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 CEACAM8P31997 349 aaPredicted RBP12.21□□□□□ -0.45
RLIM-202ENST00000349225 CHRNA7P36544 502 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 ZNF41P51814 821 aaPredicted RBP12.21□□□□□ -0.45
RLIM-202ENST00000349225 EIF3IQ13347 325 aaKnown RBP12.21□□□□□ -0.45
RLIM-202ENST00000349225 MMDQ15546 238 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 TESK1Q15569 626 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 ABHD14BQ96IU4 210 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 MSL2Q9HCI7 577 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 TRIOO75962 3097 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 A0A1W2PQF6 199 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 GYPAP02724 150 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 WNT2P09544 360 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 TCN2P20062 427 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 COTL1Q14019 142 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 SPIN3Q5JUX0 258 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 SAPCD1Q5SSQ6 148 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 SLC25A24Q6NUK1 477 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 MRPL30Q8TCC3 161 aaKnown RBP12.21□□□□□ -0.45
RLIM-202ENST00000349225 SPPL3Q8TCT6 385 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 HLA-CQ95604 372 aa12.21□□□□□ -0.45
RLIM-202ENST00000349225 A0A1W2PNR3 127 aa12.21□□□□□ -0.46
RLIM-202ENST00000349225 VDAC1P21796 283 aa12.21□□□□□ -0.46
RLIM-202ENST00000349225 CTSSP25774 331 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms