RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 BSXQ3C1V8 233 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 OR52M1Q8NGK5 317 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 CORO2AQ92828 525 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 MOB3AQ96BX8 217 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 DAZAP1Q96EP5 407 aaKnown RBP12.8□□□□□ -0.36
NUP50-201ENST00000347635 SNX22Q96L94 193 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 RTBDNQ9BSG5 229 aaPredicted RBP12.8□□□□□ -0.36
NUP50-201ENST00000347635 CTDSP1Q9GZU7 261 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 SH3BGRL3Q9H299 93 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 IGKV3D-11A0A0A0MRZ8 115 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 CEACAM1P13688 526 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 ATP6V1FQ16864 119 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 Q9N2K0 584 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 LOC390937A0A1W2PQ73 354 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 SMIM8Q96KF7 97 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 TMEM147Q9BVK8 224 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 MPC1Q9Y5U8 109 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 DHRS7CA6NNS2 312 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 HLA-GP17693 338 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 TMEM187Q14656 261 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 TMEM252Q8N6L7 170 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 OR10A7Q8NGE5 316 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 LILRB1Q8NHL6 650 aaPredicted RBP12.79□□□□□ -0.36
NUP50-201ENST00000347635 EDARADDQ8WWZ3 215 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 OR2W1Q9Y3N9 320 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 MPZP25189 248 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 RUNX1Q01196 453 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 DBX2Q6ZNG2 339 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 OR51M1Q9H341 326 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 MANBALQ9NQG1 85 aa12.79□□□□□ -0.36
NUP50-201ENST00000347635 CHRNB4P30926 498 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 TMPRSS3P57727 454 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 FAM209BQ5JX69 171 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 RNF126Q9BV68 326 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 OR2D2Q9H210 308 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 PRSS50Q9UI38 385 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 RPH3ALQ9UNE2 315 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 SCN2AQ99250 2005 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 F8VVB4 439 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 F8VWA3 439 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 MMP9P14780 707 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 SNAI3Q3KNW1 292 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 KRTCAP3Q53RY4 240 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 SIGLECL1Q8N7X8 197 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 FAM103A1Q9BTL3 118 aaKnown RBP12.78□□□□□ -0.36
NUP50-201ENST00000347635 FOSL1P15407 271 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 MAGEA5P43359 124 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 TPPP2P59282 170 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 PMS2P11Q13670 270 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 MRGPRGQ86SM5 289 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 RBMXL3Q8N7X1 1067 aaKnown RBP12.78□□□□□ -0.36
NUP50-201ENST00000347635 RARRES2Q99969 163 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 FGF16O43320 207 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 TNFRSF1AP19438 455 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 H1FOOQ8IZA3 346 aaPredicted RBP12.78□□□□□ -0.36
NUP50-201ENST00000347635 HS3ST3B1Q9Y662 390 aa12.78□□□□□ -0.36
NUP50-201ENST00000347635 A0A087X0M5 115 aa12.77□□□□□ -0.36
NUP50-201ENST00000347635 A0A1B0GX30 115 aa12.77□□□□□ -0.36
NUP50-201ENST00000347635 HSPB1P04792 205 aaKnown RBP12.77□□□□□ -0.36
NUP50-201ENST00000347635 SRSF3P84103 164 aaKnown RBP12.77□□□□□ -0.36
NUP50-201ENST00000347635 SMIM21Q3B7S5 101 aa12.77□□□□□ -0.36
NUP50-201ENST00000347635 S1PR3Q99500 378 aa12.77□□□□□ -0.36
NUP50-201ENST00000347635 ZNF331Q9NQX6 463 aaPredicted RBP12.77□□□□□ -0.36
NUP50-201ENST00000347635 FNDC1Q4ZHG4 1894 aaPredicted RBP12.77□□□□□ -0.36
NUP50-201ENST00000347635 GATCO43716 136 aaKnown RBP12.77□□□□□ -0.36
NUP50-201ENST00000347635 PSG2P11465 335 aa12.77□□□□□ -0.36
NUP50-201ENST00000347635 CSRP1P21291 193 aaKnown RBP12.77□□□□□ -0.36
NUP50-201ENST00000347635 PPP1CCP36873 323 aaKnown RBP12.77□□□□□ -0.36
NUP50-201ENST00000347635 CDC34P49427 236 aaPredicted RBP12.77□□□□□ -0.36
NUP50-201ENST00000347635 CD81P60033 236 aa12.77□□□□□ -0.36
NUP50-201ENST00000347635 OR4A4PQ8NGN8 299 aa12.77□□□□□ -0.36
NUP50-201ENST00000347635 ANAPC16Q96DE5 110 aa12.77□□□□□ -0.36
NUP50-201ENST00000347635 NEIL1Q96FI4 390 aaPredicted RBP12.77□□□□□ -0.36
NUP50-201ENST00000347635 TXN2Q99757 166 aa12.77□□□□□ -0.36
NUP50-201ENST00000347635 LYRM2Q9NU23 88 aaPredicted RBP12.77□□□□□ -0.36
NUP50-201ENST00000347635 AQP7O14520 342 aa12.77□□□□□ -0.37
NUP50-201ENST00000347635 FHITP49789 147 aa12.77□□□□□ -0.37
NUP50-201ENST00000347635 TMEM108Q6UXF1 575 aa12.77□□□□□ -0.37
NUP50-201ENST00000347635 LINC00596Q86U02 117 aa12.77□□□□□ -0.37
NUP50-201ENST00000347635 ZNF586Q9NXT0 402 aa12.77□□□□□ -0.37
NUP50-201ENST00000347635 A0A0J9YW62 118 aa12.77□□□□□ -0.37
NUP50-201ENST00000347635 SUCLG1P53597 346 aaKnown RBP12.77□□□□□ -0.37
NUP50-201ENST00000347635 TIGITQ495A1 244 aa12.77□□□□□ -0.37
NUP50-201ENST00000347635 ZNF468Q5VIY5 522 aaPredicted RBP12.77□□□□□ -0.37
NUP50-201ENST00000347635 CABIN1Q9Y6J0 2220 aa12.77□□□□□ -0.37
NUP50-201ENST00000347635 KLK2P20151 261 aa12.76□□□□□ -0.37
NUP50-201ENST00000347635 CHRNA7P36544 502 aa12.76□□□□□ -0.37
NUP50-201ENST00000347635 PSG4Q00888 419 aa12.76□□□□□ -0.37
NUP50-201ENST00000347635 ZNF92Q03936 586 aa12.76□□□□□ -0.37
NUP50-201ENST00000347635 SHISA5Q8N114 240 aa12.76□□□□□ -0.37
NUP50-201ENST00000347635 MRGPRFQ96AM1 343 aa12.76□□□□□ -0.37
NUP50-201ENST00000347635 ABHD14BQ96IU4 210 aa12.76□□□□□ -0.37
NUP50-201ENST00000347635 BCL2P10415 239 aa12.76□□□□□ -0.37
NUP50-201ENST00000347635 RAB4AP20338 218 aa12.76□□□□□ -0.37
NUP50-201ENST00000347635 TAS2R45P59539 299 aa12.76□□□□□ -0.37
NUP50-201ENST00000347635 TLE1Q04724 770 aa12.76□□□□□ -0.37
NUP50-201ENST00000347635 IGFBP7Q16270 282 aa12.76□□□□□ -0.37
NUP50-201ENST00000347635 HFEQ30201 348 aa12.76□□□□□ -0.37
NUP50-201ENST00000347635 METTL1Q9UBP6 276 aaKnown RBP12.76□□□□□ -0.37
NUP50-201ENST00000347635 OR5H1A6NKK0 313 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms