RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CBY1Q9Y3M2 126 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 V9GYS6 101 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 PTPRSQ13332 1948 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 DTYMKP23919 212 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 NPBWR2P48146 333 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 RPL23P62829 140 aaKnown RBP12.79□□□□□ -0.36
CLCN1-201ENST00000343257 OR51G1Q8NGK1 321 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 TCFL5Q9UL49 500 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 MSR1P21757 451 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 TNFRSF4P43489 277 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 RAB35Q15286 201 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 GJC3Q8NFK1 279 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 OR4F5Q8NH21 305 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 PLPPR1Q8TBJ4 325 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 ZNF385AQ96PM9 386 aaKnown RBP12.79□□□□□ -0.36
CLCN1-201ENST00000343257 OR4F4Q96R69 305 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 SLC25A22Q9H936 323 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 VAX2Q9UIW0 290 aa12.79□□□□□ -0.36
CLCN1-201ENST00000343257 ZNF16P17020 682 aaPredicted RBP12.78□□□□□ -0.36
CLCN1-201ENST00000343257 TOMM20LQ6UXN7 152 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 OR10G3Q8NGC4 313 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 UBALD1Q8TB05 177 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 OIT3Q8WWZ8 545 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 BADQ92934 168 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 MSL2Q9HCI7 577 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 TMEM242Q9NWH2 141 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 TAAR3PQ9P1P4 343 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 NAT8Q9UHE5 227 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 PAM16Q9Y3D7 125 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 GRIFINA4D1Z8 144 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 RPLP1P05386 114 aaKnown RBP12.78□□□□□ -0.36
CLCN1-201ENST00000343257 IGHV4-34P06331 123 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 ID3Q02535 119 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 IL24Q13007 206 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 ENDOGQ14249 297 aaKnown RBP12.78□□□□□ -0.36
CLCN1-201ENST00000343257 ZNF774Q6NX45 483 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 MS4A10Q96PG2 267 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 SLC39A9Q9NUM3 307 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 NAGKQ9UJ70 344 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 CABIN1Q9Y6J0 2220 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 COL4A2P08572 1712 aa12.78□□□□□ -0.36
CLCN1-201ENST00000343257 B4E171 279 aa12.77□□□□□ -0.36
CLCN1-201ENST00000343257 TCF21O43680 179 aa12.77□□□□□ -0.36
CLCN1-201ENST00000343257 CA11O75493 328 aa12.77□□□□□ -0.36
CLCN1-201ENST00000343257 TRAPPC6AO75865 159 aa12.77□□□□□ -0.36
CLCN1-201ENST00000343257 TSPAN7P41732 249 aa12.77□□□□□ -0.36
CLCN1-201ENST00000343257 TRA2AQ13595 282 aaKnown RBP eCLIP12.77□□□□□ -0.36
CLCN1-201ENST00000343257 FAM78BQ5VT40 261 aa12.77□□□□□ -0.36
CLCN1-201ENST00000343257 OR8G2PQ6IF36 304 aa12.77□□□□□ -0.36
CLCN1-201ENST00000343257 OR2V1Q8NHB1 315 aa12.77□□□□□ -0.36
CLCN1-201ENST00000343257 TMEM106CQ9BVX2 250 aa12.77□□□□□ -0.36
CLCN1-201ENST00000343257 OR51I2Q9H344 312 aa12.77□□□□□ -0.36
CLCN1-201ENST00000343257 G3V3Y1 287 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 UCP3P55916 312 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 PMP22Q01453 160 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 ZNF92Q03936 586 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 ZNF441Q8N8Z8 693 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 OR2T10Q8NGZ9 312 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 DNASE2BQ8WZ79 361 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 UCN2Q96RP3 112 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 CTDSP1Q9GZU7 261 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 TRBV11-1A0A0K0K1C0 115 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 A0A1W2PNV4 684 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 HPRT1P00492 218 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 RAB4AP20338 218 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 HNF1AP20823 631 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 MDH2P40926 338 aaKnown RBP12.77□□□□□ -0.37
CLCN1-201ENST00000343257 SPANXN5Q5MJ07 72 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 TCF23Q7RTU1 214 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 TMEM170AQ8WVE7 144 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 GPR146Q96CH1 333 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 PARD6AQ9NPB6 346 aa12.77□□□□□ -0.37
CLCN1-201ENST00000343257 UBE2L5PA0A1B0GUS4 154 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 ZNF320A2RRD8 509 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 LINC01565O15544 149 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 NRASP01111 189 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 OR1D5P58170 312 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 OR5I1Q13606 314 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 PLPPR5Q32ZL2 321 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 Q6ZRM9 215 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 MAML2Q8IZL2 1156 aaPredicted RBP12.76□□□□□ -0.37
CLCN1-201ENST00000343257 ZNF845Q96IR2 970 aaPredicted RBP12.76□□□□□ -0.37
CLCN1-201ENST00000343257 OXGR1Q96P68 337 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 HS3ST6Q96QI5 342 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 PARLQ9H300 379 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 IL36RNQ9UBH0 155 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 TLX3O43711 291 aaPredicted RBP12.76□□□□□ -0.37
CLCN1-201ENST00000343257 CA3P07451 260 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 GABRG2P18507 467 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 TCN2P20062 427 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 VDAC1P21796 283 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 BAXQ07812 192 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 NMSQ5H8A3 153 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 PLCXD3Q63HM9 321 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 OR5L2Q8NGL0 311 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 KLHDC7BQ96G42 594 aa12.76□□□□□ -0.37
CLCN1-201ENST00000343257 TRAV39A0A0B4J263 110 aa12.75□□□□□ -0.37
CLCN1-201ENST00000343257 ZNF816-ZNF321PA0A0X1KG74 233 aa12.75□□□□□ -0.37
CLCN1-201ENST00000343257 ETV2O00321 342 aaPredicted RBP12.75□□□□□ -0.37
CLCN1-201ENST00000343257 PDCD6O75340 191 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms