RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 MFAP2P55001 183 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 FAM157AC9JC47 383 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 SFT2D2O95562 160 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 TNFRSF19Q9NS68 423 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 TRBV7-9A0A0J9YWB2 115 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 C19orf67A6NJJ6 358 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 MOSPD3O75425 235 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 SP6Q3SY56 376 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 MRC1P22897 1456 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 CXorf67Q86X51 503 aaPredicted RBP15.66■□□□□ 0.1
SMAD4-201ENST00000342988 STPG2Q8N412 459 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 NUDT8Q8WV74 236 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 RCC2Q9P258 522 aaKnown RBP15.66■□□□□ 0.1
SMAD4-201ENST00000342988 KLK11Q9UBX7 282 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 OR1L8Q8NGR8 309 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 ARHGAP5-AS1Q96IT6 56 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 MRGPRX3Q96LB0 322 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 PAXXQ9BUH6 204 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 AUNIPQ9H7T9 357 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 H7C1H1 209 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 ABHD14BQ96IU4 210 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 PLPP1O14494 284 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 PLAUP00749 431 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 LRP12Q9Y561 859 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 KNDC1Q76NI1 1749 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 CNTFRP26992 372 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 SPINK9Q5DT21 86 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 WDTC1Q8N5D0 677 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 TMEM99Q8N816 258 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 TRBV9A0A0B4J1U6 114 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 VDAC1P21796 283 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 HOXD9P28356 352 aaPredicted RBP15.65■□□□□ 0.1
SMAD4-201ENST00000342988 MFRPQ9BY79 579 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 PRDM14Q9GZV8 571 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 TRAV21A0A0B4J279 112 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 NKX2-8O15522 239 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 MPV17LQ2QL34 196 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 ANKRD37Q7Z713 158 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 BAHD1Q8TBE0 780 aaPredicted RBP15.65■□□□□ 0.1
SMAD4-201ENST00000342988 C10orf35Q96D05 121 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 LPAR2Q9HBW0 351 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 PSMG4Q5JS54 123 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 RAX2Q96IS3 184 aa15.65■□□□□ 0.1
SMAD4-201ENST00000342988 PLXNA1Q9UIW2 1896 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 LDLRAD3Q86YD5 345 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 A0A1W2PNR3 127 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 SHISA7A6NL88 538 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 PSG9Q00887 426 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 C2orf83Q53S99 150 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 NCMAPQ5T1S8 102 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 P2RX4Q99571 388 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 CLDN10P78369 228 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 FAM53BQ14153 422 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 OR8G5Q8NG78 346 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 PTPRDP23468 1912 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 CTSDP07339 412 aaPredicted RBP15.64■□□□□ 0.09
SMAD4-201ENST00000342988 YIPF6Q96EC8 236 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 TMEM272A0A1B0GTI8 110 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 UPK1AO00322 258 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 TNFSF15O95150 251 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 SOD3P08294 240 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 HOXD3P31249 432 aaPredicted RBP15.64■□□□□ 0.09
SMAD4-201ENST00000342988 ZNF137PP52743 207 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 B4GALNT1Q00973 533 aa15.64■□□□□ 0.09
SMAD4-201ENST00000342988 B4GALT3O60512 393 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 ALKBH3Q96Q83 286 aaPredicted RBP15.63■□□□□ 0.09
SMAD4-201ENST00000342988 SNRPD3P62318 126 aaKnown RBP15.63■□□□□ 0.09
SMAD4-201ENST00000342988 HIST1H1AQ02539 215 aaPredicted RBP15.63■□□□□ 0.09
SMAD4-201ENST00000342988 ALG14Q96F25 216 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 GLRX2Q9NS18 164 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 ZDHHC8Q9ULC8 765 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 AMY1AP04745 511 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 FMODQ06828 376 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 OR10D3Q8NH80 312 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 MGST2Q99735 147 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 HEXA-AS1Q9H8Q6 139 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 TRAV17A0A0B4J275 112 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 SNAI1O95863 264 aaPredicted RBP15.63■□□□□ 0.09
SMAD4-201ENST00000342988 CA6P23280 308 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 AVPR2P30518 371 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 OTOSQ8NHW6 89 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 TMEM249Q2WGJ8 235 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 SEZ6L2Q6UXD5 910 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 DAPP1Q9UN19 280 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 STARD10Q9Y365 291 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 PDCD6O75340 191 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 PFN3P60673 137 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 OR6X1Q8NH79 312 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 SLC37A2Q8TED4 501 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 RLN3Q8WXF3 142 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 HARBI1Q96MB7 349 aa15.63■□□□□ 0.09
SMAD4-201ENST00000342988 DOCK1Q14185 1865 aa15.62■□□□□ 0.09
SMAD4-201ENST00000342988 OR2A4O95047 310 aa15.62■□□□□ 0.09
SMAD4-201ENST00000342988 MALP21145 153 aa15.62■□□□□ 0.09
SMAD4-201ENST00000342988 OR2A7Q96R45 310 aa15.62■□□□□ 0.09
SMAD4-201ENST00000342988 ANAPC13Q9BS18 74 aa15.62■□□□□ 0.09
SMAD4-201ENST00000342988 ISG20L2Q9H9L3 353 aaKnown RBP15.62■□□□□ 0.09
SMAD4-201ENST00000342988 FCGR2BP31994 310 aaPredicted RBP15.62■□□□□ 0.09
SMAD4-201ENST00000342988 PPP1R1AQ13522 171 aa15.62■□□□□ 0.09
SMAD4-201ENST00000342988 AFMIDQ63HM1 303 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms