RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 FAHP16930 419 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 GCH1P30793 250 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 GALR1P47211 349 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 HINT1P49773 126 aaPredicted RBP10.26□□□□□ -0.77
RTN3-203ENST00000341307 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.26□□□□□ -0.775e-6■■■□□ 15.4
RTN3-203ENST00000341307 SMIM21Q3B7S5 101 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 GPR157Q5UAW9 335 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 ZNF709Q8N972 641 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 OR2M7Q8NG81 312 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 SAP25Q8TEE9 199 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 LIPHQ8WWY8 451 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 TMEM234Q8WY98 164 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 RBMXL1Q96E39 390 aaKnown RBP10.26□□□□□ -0.77
RTN3-203ENST00000341307 AMELYQ99218 206 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 C1orf123Q9NWV4 160 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 WISP1O95388 367 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 UTS2O95399 124 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 BMP5P22003 454 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 TNFSF4P23510 183 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 CDKN2AP42771 156 aaKnown RBP10.25□□□□□ -0.77
RTN3-203ENST00000341307 ZNF117Q03924 483 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 LINC00114Q6XXX2 140 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 LRRC69Q6ZNQ3 347 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 LYPD6Q86Y78 171 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 CALHM1Q8IU99 346 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 ADIPOR1Q96A54 375 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 GPR84Q9NQS5 396 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 CLEC5AQ9NY25 188 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 CLN8Q9UBY8 286 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 WIPI2Q9Y4P8 454 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 RALGAPA1Q6GYQ0 2036 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 FRYQ5TBA9 3013 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 GFRA3O60609 400 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 HYPMO75409 117 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 GOSR1O95249 250 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 ALOX5APP20292 161 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 FAM69BQ5VUD6 431 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 COX15Q7KZN9 410 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 CENPVQ7Z7K6 275 aaPredicted RBP10.25□□□□□ -0.77
RTN3-203ENST00000341307 RHBDD1Q8TEB9 315 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 ASB5Q8WWX0 329 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 FAM46BQ96A09 425 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 SLC46A1Q96NT5 459 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 MEGF9Q9H1U4 602 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 Q9N2K0 584 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 LYRM2Q9NU23 88 aaPredicted RBP10.25□□□□□ -0.77
RTN3-203ENST00000341307 UQCR10Q9UDW1 63 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 ANAPC10Q9UM13 185 aa10.25□□□□□ -0.77
RTN3-203ENST00000341307 C14orf166Q9Y224 244 aaKnown RBP10.25□□□□□ -0.77
RTN3-203ENST00000341307 NSG1A0A0A6YYJ2 146 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 FAM230AA0A1W2PPH8 454 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 IGLC2P0DOY2 106 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 IGLC3P0DOY3 106 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 HNRNPA3P51991 378 aaKnown RBP10.24□□□□□ -0.77
RTN3-203ENST00000341307 ARF6P62330 175 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 ARL6IP1Q15041 203 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 C1orf100Q5SVJ3 147 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 Q6ZN92 141 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 OR4B1Q8NGF8 309 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 FAM71F1Q96KD3 344 aaPredicted RBP10.24□□□□□ -0.77
RTN3-203ENST00000341307 PLK3Q9H4B4 646 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 EHFQ9NZC4 300 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 DHDHQ9UQ10 334 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 LRP12Q9Y561 859 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 CNOT1A5YKK6 2376 aaKnown RBP10.24□□□□□ -0.77
RTN3-203ENST00000341307 TYMSP04818 313 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 DBHP09172 617 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 RBMXP38159 391 aaKnown RBP10.24□□□□□ -0.77
RTN3-203ENST00000341307 LINC00310P59036 64 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 FNDC7Q5VTL7 733 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 ERASQ7Z444 233 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 MARCH3Q86UD3 253 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 CISD2Q8N5K1 135 aaKnown RBP10.24□□□□□ -0.77
RTN3-203ENST00000341307 LPAR5Q9H1C0 372 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 SLC5A6Q9Y289 635 aa10.24□□□□□ -0.77
RTN3-203ENST00000341307 KIAA2026Q5HYC2 2103 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 LAMA5O15230 3695 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 IGKV1D-42A0A075B6H8 117 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 TRAV34A0A0B4J273 112 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 IGHV5-10-1A0A0J9YXX1 117 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 FRG2CA6NGY1 282 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 K7ERU9 68 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 BPNT1O95861 308 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 HRASP01112 189 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 CTSDP07339 412 aaPredicted RBP10.23□□□□□ -0.77
RTN3-203ENST00000341307 FSTP19883 344 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 VAMP3Q15836 100 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 ADIRFQ15847 76 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 SNAI3Q3KNW1 292 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 SPATA45Q537H7 98 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 PLA2G2CQ5R387 149 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 PRR27Q6MZM9 219 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 DPY19L4Q7Z388 723 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 Q8N976 141 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 CMTM2Q8TAZ6 248 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 SCGB3A2Q96PL1 93 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 TXN2Q99757 166 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 ABHD6Q9BV23 337 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 WDR76Q9H967 626 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 AKIRIN1Q9H9L7 192 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms