RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 TAL1P17542 331 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 OR10G8Q8NGN5 311 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 RAB40CQ96S21 281 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 GFI1Q99684 422 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 MRPL18Q9H0U6 180 aaKnown RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 FBXL7Q9UJT9 491 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 CTXND1A0A1B0GTU2 59 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 NKX2-8O15522 239 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 SNAI2O43623 268 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 CELA2BP08218 269 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 CD226Q15762 336 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 ASTLQ6HA08 431 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF467Q7Z7K2 595 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 OR10D3Q8NH80 312 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 RTN4IP1Q8WWV3 396 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF775Q96BV0 537 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 QTRT1Q9BXR0 403 aaKnown RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 NAA60Q9H7X0 242 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 WDR76Q9H967 626 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF331Q9NQX6 463 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 CD207Q9UJ71 328 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 NUP188Q5SRE5 1749 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 IGKV6-21A0A0C4DH24 114 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 hCG_38984A0A1B0GV85 526 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 SMIM35A0A1B0GVV1 85 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 SLC16A7O60669 478 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 SPINK8P0C7L1 97 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 COX5AP20674 150 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 ACRV1P26436 265 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 ID4P47928 161 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 EGR4Q05215 589 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 EMC4Q5J8M3 183 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 FAM166AQ6J272 317 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 FBXL14Q8N1E6 418 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 OR10G9Q8NGN4 311 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 NANOS1Q8WY41 292 aaKnown RBP3.6□□□□□ -1.83
NEDD4-201ENST00000338963 PP6455Q8WZ26 134 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 SLC25A33Q9BSK2 321 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 COMMD5Q9GZQ3 224 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 TRBV5-4A0A0C4DH59 114 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 A0A0G2JLM5 398 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 NPIPB15A6NHN6 443 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-201ENST00000338963 GRXCR1A8MXD5 290 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 PTGESO14684 152 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 SMIM13P0DJ93 91 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 IL3RAP26951 378 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 H2BFWTQ7Z2G1 175 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 LRRC75A-AS1Q8N1F1 130 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 OR5AN1Q8NGI8 311 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 C4orf45Q96LM5 186 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 OR2D2Q9H210 308 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF286AQ9HBT8 521 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 RAB9BQ9NP90 201 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 THYN1Q9P016 225 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 F2RL2O00254 374 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 RPS4XP62701 263 aaKnown RBP3.6□□□□□ -1.83
NEDD4-201ENST00000338963 CCL15Q16663 113 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 TDRG1Q3Y452 100 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 PDLIM3Q53GG5 364 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-201ENST00000338963 BRICD5Q6PL45 260 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 C8orf86Q6ZUL3 223 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 PRRT2Q7Z6L0 340 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-201ENST00000338963 PDCD1LG2Q9BQ51 273 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 MAP1LC3AQ9H492 121 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF646O15015 1829 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-201ENST00000338963 ZNFX1Q9P2E3 1918 aaKnown RBP3.6□□□□□ -1.83
NEDD4-201ENST00000338963 FAM231BA6NCW3 169 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF217O75362 1048 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 MPZL1O95297 269 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 C3orf79P0CE67 100 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 C9orf57Q5W0N0 161 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 CDC42EP5Q6NZY7 148 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 UBALD2Q8IYN6 164 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 PPP1R35Q8TAP8 253 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 IGSF8Q969P0 613 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 TMEM230Q96A57 120 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 SLC25A44Q96H78 314 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-201ENST00000338963 RASL10BQ96S79 203 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 DMRT3Q9NQL9 472 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 VDAC3Q9Y277 283 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 IER3IP1Q9Y5U9 82 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 IGKV6D-21A0A0A0MT36 114 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 SMIM28A0A1B0GU29 152 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 LRRC3CA6NJW4 275 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 H3BUT2 72 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 J3KT08 172 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 TBL1XO60907 577 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 B3GALT4O96024 378 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 KLKB1P03952 638 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 AMY1AP04745 511 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF20P17024 532 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 CCKBRP32239 447 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 ABHD17CQ6PCB6 329 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 TMEM136Q6ZRR5 245 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 OR4F5Q8NH21 305 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 C18orf32Q8TCD1 76 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 LMX1AQ8TE12 382 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 TMEM190Q8WZ59 177 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 OR4F4Q96R69 305 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 TIMP4Q99727 224 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms