RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 HDHD3Q9BSH5 251 aaPredicted RBP13.13□□□□□ -0.31
LRRC28-202ENST00000331450 NXF2Q9GZY0 626 aaKnown RBP13.13□□□□□ -0.31
LRRC28-202ENST00000331450 ZMAT3Q9HA38 289 aaKnown RBP13.13□□□□□ -0.31
LRRC28-202ENST00000331450 C12orf4Q9NQ89 552 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 CALYQ9NYX4 217 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 A0A075B6Q4 140 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 CENPVL3A0A0U1RRI6 287 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 hCG_1809904A0A1W2PP81 198 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 A0A1W2PPE2 198 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 A0A1W2PR64 198 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 A0A1W2PRV1 198 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 A6NHS1 94 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 POM121CA8CG34 1229 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 RNASEK-C17orf49H0YIS7 233 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 ORC5O43913 435 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 IGHV4-38-2P0DP08 117 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 RCC1P18754 421 aaPredicted RBP13.12□□□□□ -0.31
LRRC28-202ENST00000331450 GDNFP39905 211 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 MOB1BQ7L9L4 216 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 ZNF554Q86TJ5 538 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 NANPQ8TBE9 248 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 CMSS1Q9BQ75 279 aaKnown RBP13.12□□□□□ -0.31
LRRC28-202ENST00000331450 MIXL1Q9H2W2 232 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 RIMS4Q9H426 269 aaPredicted RBP13.12□□□□□ -0.31
LRRC28-202ENST00000331450 ELF5Q9UKW6 265 aaPredicted RBP13.12□□□□□ -0.31
LRRC28-202ENST00000331450 TRAPPC2LQ9UL33 140 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 HIVEP2P31629 2446 aa13.12□□□□□ -0.31
LRRC28-202ENST00000331450 FN1P02751 2386 aaKnown RBP13.12□□□□□ -0.31
LRRC28-202ENST00000331450 C12orf77C9JDV5 145 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 XRCC3O43542 346 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 CRLF1O75462 422 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 ELK1P19419 428 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 GZMHP20718 246 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 KLRD1Q13241 179 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 HMGN3Q15651 99 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 CDNFQ49AH0 187 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 C6orf183Q5T699 404 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 PRAMEF5Q5TYX0 476 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 NCR3LG1Q68D85 454 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 TRAT1Q6PIZ9 186 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 ZNF782Q6ZMW2 699 aaPredicted RBP13.11□□□□□ -0.31
LRRC28-202ENST00000331450 LHX4Q969G2 390 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 PHF21AQ96BD5 680 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 S100A16Q96FQ6 103 aaKnown RBP13.11□□□□□ -0.31
LRRC28-202ENST00000331450 KIRREL1Q96J84 757 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 DCUN1D5Q9BTE7 237 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 DIABLOQ9NR28 239 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 SESN1Q9Y6P5 492 aa13.11□□□□□ -0.31
LRRC28-202ENST00000331450 TRAV18A0A075B6X5 111 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 A0A087X0M5 115 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 A0A1B0GX30 115 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 TMEM235A6NFC5 223 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 F2RL2O00254 374 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 CTDSP2O14595 271 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 MELTFP08582 738 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 FCGR3AP08637 254 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 CD3GP09693 182 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 OMGP23515 440 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 PRB3Q04118 309 aaPredicted RBP13.1□□□□□ -0.31
LRRC28-202ENST00000331450 PNLIPRP3Q17RR3 467 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 TUSC1Q2TAM9 212 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 CHRFAM7AQ494W8 412 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 HACD4Q5VWC8 232 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 BAIAP2L2Q6UXY1 529 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 LAX1Q8IWV1 398 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 OR10A7Q8NGE5 316 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 BEX2Q9BXY8 128 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 AUNIPQ9H7T9 357 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 TAF9BQ9HBM6 251 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 Q9N2K0 584 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 IDI2-AS1Q9NZ38 188 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 NUP50Q9UKX7 468 aa13.1□□□□□ -0.31
LRRC28-202ENST00000331450 SONP18583 2426 aaKnown RBP13.09□□□□□ -0.31
LRRC28-202ENST00000331450 IGHV1-69DA0A0B4J2H0 117 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 SSX5O60225 188 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 IGHV1-69P01742 117 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 CD34P28906 385 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 TAS2R20P59543 309 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 GUCA2AQ02747 115 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 ARFRP1Q13795 201 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 UTF1Q5T230 341 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 GPR157Q5UAW9 335 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 OR52W1Q6IF63 320 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 C9orf139Q6ZV77 190 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 IZUMO1Q8IYV9 350 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 MCFD2Q8NI22 146 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 NUDCD2Q8WVJ2 157 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 ARL11Q969Q4 196 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 TEP1Q99973 2627 aaKnown RBP13.09□□□□□ -0.31
LRRC28-202ENST00000331450 TMEM133Q9H2Q1 129 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 HEXA-AS1Q9H8Q6 139 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 CHMP1AQ9HD42 196 aaPredicted RBP13.09□□□□□ -0.31
LRRC28-202ENST00000331450 A3GALT2U3KPV4 340 aa13.09□□□□□ -0.31
LRRC28-202ENST00000331450 IGHV3OR16-10A0A075B7F0 116 aa13.08□□□□□ -0.32
LRRC28-202ENST00000331450 ODF3BA8MYP8 253 aa13.08□□□□□ -0.32
LRRC28-202ENST00000331450 HBZP02008 142 aa13.08□□□□□ -0.32
LRRC28-202ENST00000331450 DTYMKP23919 212 aa13.08□□□□□ -0.32
LRRC28-202ENST00000331450 FPR2P25090 351 aa13.08□□□□□ -0.32
LRRC28-202ENST00000331450 SRP14P37108 136 aaKnown RBP13.08□□□□□ -0.32
LRRC28-202ENST00000331450 MNDAP41218 407 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms