RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 Q8TCH9 128 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 RDH5Q92781 318 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 DECR2Q9NUI1 292 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 ETAA1Q9NY74 926 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 EHFQ9NZC4 300 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 NPTNQ9Y639 398 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 NDUFS8O00217 210 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 SNAPC5O75971 98 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 IGHV4-31P0DP07 118 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 ZNF44P15621 663 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 FPR2P25090 351 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 SEC61A1P61619 476 aaKnown RBP13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 PAX5Q02548 391 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 SLC25A42Q86VD7 318 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 GAPTQ8N292 157 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 TMEM185AQ8NFB2 350 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 PPP1R35Q8TAP8 253 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 NEK7Q8TDX7 302 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 DACT3Q96B18 629 aaPredicted RBP13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 EGLN1Q9GZT9 426 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 Q9N2K0 584 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 C1orf123Q9NWV4 160 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 SLC23A1Q9UHI7 598 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 FLVCR2Q9UPI3 526 aa13.73□□□□□ -0.21
PDLIM1-201ENST00000329399 TRAV24A0A0B4J272 114 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 IGHV3-64DA0A0J9YX35 117 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 SRRM5B3KS81 715 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 SSNA1O43805 119 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 HAND1O96004 215 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 OR5H8P0DN80 308 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 GLP1RP43220 463 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 CBX3Q13185 183 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 PAN3Q58A45 887 aaKnown RBP13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 ATPAF1Q5TC12 328 aaPredicted RBP13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 ZNF880Q6PDB4 577 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 OR11L1Q8NGX0 322 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 ZFAND1Q8TCF1 268 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 ZNF488Q96MN9 340 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 OR2V2Q96R30 315 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 NARFLQ9H6Q4 476 aa13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 ZNF230Q9UIE0 474 aaPredicted RBP13.72□□□□□ -0.21
PDLIM1-201ENST00000329399 IGHV1-69-2A0A0G2JMI3 117 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 hCG_1807616A0A1W2PRN6 198 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 TRDCB7Z8K6 153 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 OR2H2O95918 312 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 CSN2P05814 226 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 OR4E1P0C645 316 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 SULT1A3P0DMM9 295 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 SULT1A4P0DMN0 295 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 UCP3P55916 312 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 TNFAIP6P98066 277 aaPredicted RBP13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 LPCAT3Q6P1A2 487 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 PEG10Q86TG7 708 aaKnown RBP13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 RTN4RL2Q86UN3 420 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 ZNF431Q8TF32 576 aaPredicted RBP13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 ST6GAL2Q96JF0 529 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 CHODLQ9H9P2 273 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 GPR132Q9UNW8 380 aa13.71□□□□□ -0.21
PDLIM1-201ENST00000329399 ATRQ13535 2644 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 SLC33A1O00400 549 aaPredicted RBP13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 PPIHO43447 177 aaKnown RBP13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 CD5LO43866 347 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 LHBP01229 141 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 ANXA7P20073 488 aaKnown RBP13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 MRPS11P82912 194 aaKnown RBP13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 C4orf46Q504U0 113 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 TMEM128Q5BJH2 165 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 AVPI1Q5T686 147 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 PRAMEF6Q5VXH4 476 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 OR4A4PQ8NGN8 299 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 LRRC29Q8WV35 223 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 MSI2Q96DH6 328 aaKnown RBP13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 HDHD3Q9BSH5 251 aaPredicted RBP13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 NCOR1P1Q9H4R4 102 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 SAP30LQ9HAJ7 183 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 TMEM165Q9HC07 324 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 RNF7Q9UBF6 113 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 PCDHB10Q9UN67 800 aa13.7□□□□□ -0.22
PDLIM1-201ENST00000329399 ARHGAP32A7KAX9 2087 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 LRRC30A6NM36 301 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 OR2AT4A6NND4 320 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 TK1P04183 234 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 ANXA3P12429 323 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 IRF2P14316 349 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 TMEM33P57088 247 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 MPPED2Q15777 294 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 SLC35E4Q6ICL7 350 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 TRAT1Q6PIZ9 186 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 ZNF497Q6ZNH5 498 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 ITLN1Q8WWA0 313 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 CCL17Q92583 94 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 ZNF486Q96H40 463 aaPredicted RBP13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 WDR13Q9H1Z4 485 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 YAE1D1Q9NRH1 226 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 C14orf166Q9Y224 244 aaKnown RBP13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 WIPI2Q9Y4P8 454 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 DYSFO75923 2080 aa13.69□□□□□ -0.22
PDLIM1-201ENST00000329399 DUSP1P28562 367 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 GPR6P46095 362 aaPredicted RBP13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 HOXA4Q00056 320 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms