RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 OR6C6A6NF89 314 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 F6UZH7 168 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 TMPRSS2O15393 492 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 CRYGSP22914 178 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 ARL3P36405 182 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 GFERP55789 205 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 RPL23P62829 140 aaKnown RBP4.12□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF542PQ5EBM4 170 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 RHBDD2Q6NTF9 364 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 RABEPKQ7Z6M1 372 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 ZBTB34Q8NCN2 500 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 TET1Q8NFU7 2136 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 RPUSD4Q96CM3 377 aaKnown RBP4.12□□□□□ -1.75
PTPN13-201ENST00000316707 SPACA9Q96E40 222 aaPredicted RBP4.12□□□□□ -1.75
PTPN13-201ENST00000316707 OR51B6Q9H340 312 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 FGF21Q9NSA1 209 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM106BQ9NUM4 274 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 FUT9Q9Y231 359 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 C10orf142B7Z368 130 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 DEGS1O15121 323 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 MT-ND6P03923 174 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 PPP1CBP62140 327 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 KLHDC1Q8N7A1 406 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 CPT1CQ8TCG5 803 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 ZCCHC14Q8WYQ9 949 aaKnown RBP4.12□□□□□ -1.75
PTPN13-201ENST00000316707 LYZL4Q96KX0 146 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 OR2W1Q9Y3N9 320 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 IGLV3-12A0A075B6K2 115 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 FAM221AA4D161 298 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 TOX3O15405 576 aaPredicted RBP4.11□□□□□ -1.75
PTPN13-201ENST00000316707 PDE6DO43924 150 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 TNFSF13O75888 250 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 PCP4P48539 62 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 CASP6P55212 293 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM31Q5JXX7 168 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 RIPPLY2Q5TAB7 128 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 TAF15Q92804 592 aaKnown RBP eCLIP4.11□□□□□ -1.75
PTPN13-201ENST00000316707 HLA-CQ95604 372 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 RNF2Q99496 336 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM147Q9BVK8 224 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 WDR61Q9GZS3 305 aaKnown RBP4.11□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF586Q9NXT0 402 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 ATP23Q9Y6H3 246 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 TCF20Q9UGU0 1960 aaKnown RBP4.11□□□□□ -1.75
PTPN13-201ENST00000316707 TRPM6Q9BX84 2022 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 OR2J2O76002 312 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 SYNGR4O95473 234 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 IGHV4-34P06331 123 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 YPEL3P61236 119 aaPredicted RBP4.11□□□□□ -1.75
PTPN13-201ENST00000316707 ZFP36L1Q07352 338 aaKnown RBP4.11□□□□□ -1.75
PTPN13-201ENST00000316707 SLC38A11Q08AI6 406 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 NRN1LQ496H8 165 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 C9orf50Q5SZB4 431 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF705AQ6ZN79 300 aaPredicted RBP4.11□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM54Q969K7 222 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 PCGF1Q9BSM1 259 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 CBLN4Q9NTU7 201 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 LIN7CQ9NUP9 197 aaKnown RBP4.11□□□□□ -1.75
PTPN13-201ENST00000316707 ZFP30Q9Y2G7 519 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 NPIPB11E5RHQ5 1161 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 EFNA2O43921 213 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 ESDP10768 282 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 CRIP3Q6Q6R5 217 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 C5orf24Q7Z6I8 188 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 POC1BQ8TC44 478 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 WDYHV1Q96HA8 205 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 RBKSQ9H477 322 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 PIAS3Q9Y6X2 628 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 SLC22A20A6NK97 555 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 LMO7DNF2Z398 122 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 SPRY1O43609 319 aaPredicted RBP4.11□□□□□ -1.75
PTPN13-201ENST00000316707 CD82P27701 267 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 COTL1Q14019 142 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 TOMM20LQ6UXN7 152 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 NUFIP2Q7Z417 695 aaKnown RBP4.11□□□□□ -1.75
PTPN13-201ENST00000316707 OR1L3Q8NH93 324 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 STRADBQ9C0K7 418 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 CCL28Q9NRJ3 127 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 TRAPPC1Q9Y5R8 145 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 TCRBV21S2A2A0A5A6 115 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 C17orf51A8MQB3 221 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 A8MXE2 369 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 KRASP01116 189 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 AGBL5Q8NDL9 886 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 OR4F5Q8NH21 305 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 CMTM2Q8TAZ6 248 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 RAB1CQ92928 201 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 GPR146Q96CH1 333 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 OR4F4Q96R69 305 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 TBX15Q96SF7 602 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 PARLQ9H300 379 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 ZDHHC11Q9H8X9 412 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 MDFIC2A0A1B0GVS7 189 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 A0A1W2PNR3 127 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 PGLYRP1O75594 196 aaPredicted RBP4.11□□□□□ -1.75
PTPN13-201ENST00000316707 GABRG2P18507 467 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 MNX1P50219 401 aaPredicted RBP4.11□□□□□ -1.75
PTPN13-201ENST00000316707 SLC22A18ASQ8N1D0 253 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 OR2D3Q8NGH3 330 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 CACNG5Q9UF02 275 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms