RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ZNF295-AS1Q8N0V1 137 aa23.53■■□□□ 1.36
CBX4-201ENST00000269397 ABHD3Q8WU67 409 aa23.53■■□□□ 1.36
CBX4-201ENST00000269397 CHD3Q12873 2000 aaKnown RBP23.53■■□□□ 1.36
CBX4-201ENST00000269397 PGLYRP1O75594 196 aaPredicted RBP23.53■■□□□ 1.36
CBX4-201ENST00000269397 NAPSAO96009 420 aa23.53■■□□□ 1.36
CBX4-201ENST00000269397 B3GALT5-AS1P59052 145 aa23.53■■□□□ 1.36
CBX4-201ENST00000269397 TLE1Q04724 770 aa23.53■■□□□ 1.36
CBX4-201ENST00000269397 GGNQ86UU5 652 aa23.53■■□□□ 1.36
CBX4-201ENST00000269397 HBE1P02100 147 aa23.52■■□□□ 1.36
CBX4-201ENST00000269397 C20orf204Q6ZNR8 217 aa23.52■■□□□ 1.36
CBX4-201ENST00000269397 SSX7Q7RTT5 188 aa23.52■■□□□ 1.36
CBX4-201ENST00000269397 STX12Q86Y82 276 aa23.52■■□□□ 1.36
CBX4-201ENST00000269397 DIDO1Q9BTC0 2240 aaKnown RBP23.52■■□□□ 1.36
CBX4-201ENST00000269397 CLEC18AA5D8T8 446 aa23.52■■□□□ 1.36
CBX4-201ENST00000269397 TRAPPC6AO75865 159 aa23.52■■□□□ 1.36
CBX4-201ENST00000269397 CEACAM1P13688 526 aa23.52■■□□□ 1.36
CBX4-201ENST00000269397 ZNF880Q6PDB4 577 aa23.52■■□□□ 1.36
CBX4-201ENST00000269397 CLEC18CQ8NCF0 446 aa23.52■■□□□ 1.36
CBX4-201ENST00000269397 OPA3Q9H6K4 179 aa23.52■■□□□ 1.36
CBX4-201ENST00000269397 GPR35Q9HC97 309 aa23.52■■□□□ 1.36
CBX4-201ENST00000269397 IL24Q13007 206 aa23.51■■□□□ 1.35
CBX4-201ENST00000269397 GPR146Q96CH1 333 aa23.51■■□□□ 1.35
CBX4-201ENST00000269397 ZNF845Q96IR2 970 aaPredicted RBP23.51■■□□□ 1.35
CBX4-201ENST00000269397 PRO1933Q9H354 126 aa23.51■■□□□ 1.35
CBX4-201ENST00000269397 ZNF391Q9UJN7 358 aa23.51■■□□□ 1.35
CBX4-201ENST00000269397 LOC102723996A0A087X1L8 192 aa23.51■■□□□ 1.35
CBX4-201ENST00000269397 IAPPP10997 89 aa23.51■■□□□ 1.35
CBX4-201ENST00000269397 HNF4GQ14541 408 aa23.51■■□□□ 1.35
CBX4-201ENST00000269397 OR10D3Q8NH80 312 aa23.51■■□□□ 1.35
CBX4-201ENST00000269397 ZNF488Q96MN9 340 aa23.51■■□□□ 1.35
CBX4-201ENST00000269397 GFOD1Q9NXC2 390 aa23.51■■□□□ 1.35
CBX4-201ENST00000269397 MTCH1Q9NZJ7 389 aa23.51■■□□□ 1.35
CBX4-201ENST00000269397 A0A096LPE4 126 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 A0A1W2PPZ6 126 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 IFNA5P01569 189 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 PRDX4Q13162 271 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 TRIM61Q5EBN2 209 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 WIPI1Q5MNZ9 446 aaPredicted RBP23.5■■□□□ 1.35
CBX4-201ENST00000269397 Q6ZRM9 215 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 RNASE11Q8TAA1 199 aaKnown RBP23.5■■□□□ 1.35
CBX4-201ENST00000269397 SH2D2AQ9NP31 389 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 GJE1A6NN92 205 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 PGA5P0DJD9 388 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 PSG2P11465 335 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 HIST1H1BP16401 226 aaKnown RBP23.5■■□□□ 1.35
CBX4-201ENST00000269397 ZNF787Q6DD87 383 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 UNQ6494/PRO21346Q6UXR6 183 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 MYPOPQ86VE0 399 aaPredicted RBP23.5■■□□□ 1.35
CBX4-201ENST00000269397 ABHD14BQ96IU4 210 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 SNX22Q96L94 193 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 TCFL5Q9UL49 500 aa23.5■■□□□ 1.35
CBX4-201ENST00000269397 HS3ST1O14792 307 aa23.49■■□□□ 1.35
CBX4-201ENST00000269397 TUSC2O75896 110 aa23.49■■□□□ 1.35
CBX4-201ENST00000269397 ZNF726P1Q15940 193 aa23.49■■□□□ 1.35
CBX4-201ENST00000269397 OR5H1A6NKK0 313 aa23.49■■□□□ 1.35
CBX4-201ENST00000269397 KLF7O75840 302 aaPredicted RBP23.49■■□□□ 1.35
CBX4-201ENST00000269397 C1orf87Q8N0U7 546 aa23.49■■□□□ 1.35
CBX4-201ENST00000269397 OR5D13Q8NGL4 314 aa23.49■■□□□ 1.35
CBX4-201ENST00000269397 FAM186AA6NE01 2351 aa23.48■■□□□ 1.35
CBX4-201ENST00000269397 METTL15P1P0C7V9 234 aa23.48■■□□□ 1.35
CBX4-201ENST00000269397 FOXO1Q12778 655 aa23.48■■□□□ 1.35
CBX4-201ENST00000269397 C14orf144Q96I85 54 aa23.48■■□□□ 1.35
CBX4-201ENST00000269397 ZNF576Q9H609 170 aa23.48■■□□□ 1.35
CBX4-201ENST00000269397 H0Y980 276 aa23.48■■□□□ 1.35
CBX4-201ENST00000269397 MMP7P09237 267 aaPredicted RBP23.48■■□□□ 1.35
CBX4-201ENST00000269397 F2RP25116 425 aa23.48■■□□□ 1.35
CBX4-201ENST00000269397 EPHA8P29322 1005 aaPredicted RBP23.48■■□□□ 1.35
CBX4-201ENST00000269397 CLDN15P56746 228 aa23.48■■□□□ 1.35
CBX4-201ENST00000269397 ARL16Q0P5N6 197 aa23.48■■□□□ 1.35
CBX4-201ENST00000269397 RDH5Q92781 318 aa23.48■■□□□ 1.35
CBX4-201ENST00000269397 DOCK7Q96N67 2140 aa23.48■■□□□ 1.35
CBX4-201ENST00000269397 LRFN1Q9P244 771 aa23.48■■□□□ 1.35
CBX4-201ENST00000269397 ARHGAP21Q5T5U3 1957 aa23.47■■□□□ 1.35
CBX4-201ENST00000269397 SYNGR1O43759 233 aa23.47■■□□□ 1.35
CBX4-201ENST00000269397 BCL2P10415 239 aa23.47■■□□□ 1.35
CBX4-201ENST00000269397 FGF12P61328 243 aa23.47■■□□□ 1.35
CBX4-201ENST00000269397 PCBD1P61457 104 aa23.47■■□□□ 1.35
CBX4-201ENST00000269397 IL1F10Q8WWZ1 152 aa23.47■■□□□ 1.35
CBX4-201ENST00000269397 C1QTNF5Q9BXJ0 243 aa23.47■■□□□ 1.35
CBX4-201ENST00000269397 KIAA2026Q5HYC2 2103 aa23.47■■□□□ 1.35
CBX4-201ENST00000269397 TRAV39A0A0B4J263 110 aa23.47■■□□□ 1.35
CBX4-201ENST00000269397 CCL4P13236 92 aa23.47■■□□□ 1.35
CBX4-201ENST00000269397 MMP9P14780 707 aa23.47■■□□□ 1.35
CBX4-201ENST00000269397 ATP23Q9Y6H3 246 aa23.47■■□□□ 1.35
CBX4-201ENST00000269397 SERPINE2P07093 398 aa23.46■■□□□ 1.35
CBX4-201ENST00000269397 ZFP36L1Q07352 338 aaKnown RBP23.46■■□□□ 1.35
CBX4-201ENST00000269397 PCSK4Q6UW60 755 aa23.46■■□□□ 1.35
CBX4-201ENST00000269397 Q6ZS49 121 aa23.46■■□□□ 1.35
CBX4-201ENST00000269397 WDR54Q9H977 334 aa23.46■■□□□ 1.35
CBX4-201ENST00000269397 ERRFI1Q9UJM3 462 aaPredicted RBP23.46■■□□□ 1.35
CBX4-201ENST00000269397 NOSIPQ9Y314 301 aaKnown RBP23.46■■□□□ 1.35
CBX4-201ENST00000269397 A0A1B0GU03 582 aa23.46■■□□□ 1.35
CBX4-201ENST00000269397 CLDN34H7C241 214 aa23.46■■□□□ 1.35
CBX4-201ENST00000269397 DFFBO76075 338 aa23.46■■□□□ 1.35
CBX4-201ENST00000269397 DUXBA0A1W2PPF3 345 aa23.46■■□□□ 1.35
CBX4-201ENST00000269397 PTBP3O95758 552 aaKnown RBP23.46■■□□□ 1.35
CBX4-201ENST00000269397 H1FOOQ8IZA3 346 aaPredicted RBP23.46■■□□□ 1.35
CBX4-201ENST00000269397 SCGB1C1Q8TD33 95 aa23.46■■□□□ 1.35
CBX4-201ENST00000269397 SPSB4Q96A44 273 aa23.46■■□□□ 1.35
CBX4-201ENST00000269397 CACNG5Q9UF02 275 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms