RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 MAP1LC3B2A6NCE7 125 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 CEACAM1P13688 526 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 CNN1P51911 297 aaKnown RBP13.38□□□□□ -0.27
TIMP3-201ENST00000266085 MISP3Q96FF7 219 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 MAP1LC3BQ9GZQ8 125 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 CTDSP1Q9GZU7 261 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 ALX4Q9H161 411 aaPredicted RBP13.38□□□□□ -0.27
TIMP3-201ENST00000266085 MMP26Q9NRE1 261 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 V9GYS6 101 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 RBP4P02753 201 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 ATP6V1FQ16864 119 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 SPINK9Q5DT21 86 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 MRPL24Q96A35 216 aaKnown RBP13.38□□□□□ -0.27
TIMP3-201ENST00000266085 TXN2Q99757 166 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 LPAR5Q9H1C0 372 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 BARX1Q9HBU1 254 aaPredicted RBP13.38□□□□□ -0.27
TIMP3-201ENST00000266085 NYNRINQ9P2P1 1898 aaKnown RBP13.38□□□□□ -0.27
TIMP3-201ENST00000266085 C1orf100Q5SVJ3 147 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 PRR27Q6MZM9 219 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 IMMP1LQ96LU5 166 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 THYN1Q9P016 225 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 TIMM9Q9Y5J7 89 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 ZFHX2Q9C0A1 2572 aaPredicted RBP13.38□□□□□ -0.27
TIMP3-201ENST00000266085 OR5H1A6NKK0 313 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 M0QZ24 198 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 ADAM10O14672 748 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 TGOLN2O43493 480 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 CHST1O43916 411 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 RAMP1O60894 148 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 AESQ08117 197 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 OR11H7Q8NGC8 314 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 UBTD1Q9HAC8 227 aa13.38□□□□□ -0.27
TIMP3-201ENST00000266085 SF3B6Q9Y3B4 125 aaKnown RBP13.38□□□□□ -0.27
TIMP3-201ENST00000266085 THSD7BQ9C0I4 1608 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 C7orf66A4D0T2 115 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 PHYHD1Q5SRE7 291 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 OR8B3Q8NGG8 313 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 OR8B2Q96RD0 313 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 VWA8A3KMH1 1905 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 SCO1O75880 301 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 CLEC12BQ2HXU8 276 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 TIMP4Q99727 224 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 TMEM147Q9BVK8 224 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 ANKRD36A6QL64 1941 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 PRR19A6NJB7 356 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 CHEK1O14757 476 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 HOXB1P14653 301 aaPredicted RBP13.37□□□□□ -0.27
TIMP3-201ENST00000266085 ZBTB34Q8NCN2 500 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 CHRDL1Q9BU40 450 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 KLK13Q9UKR3 277 aa13.37□□□□□ -0.27
TIMP3-201ENST00000266085 XKRY2A2RUG3 117 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 TMEM229AB2RXF0 380 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 PIN1P1O15428 100 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 KLF4O43474 513 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 LMX1BO60663 402 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 SFTA3P0C7M3 94 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 P2RY1P47900 373 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 FGF12P61328 243 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 RTP5Q14D33 572 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 ACSM6Q6P461 480 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 ADAMTS17Q8TE56 1095 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 C2CD4CQ8TF44 421 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 IGLV3-12A0A075B6K2 115 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 IGHV3OR15-7A0A075B7D8 119 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 FCGR3AP08637 254 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 SEZ6L2Q6UXD5 910 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 LYZL2Q7Z4W2 148 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 TGIF2LYQ8IUE0 185 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 TGIF2LXQ8IUE1 241 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 MRGPRFQ96AM1 343 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 HSD17B10Q99714 261 aaKnown RBP13.36□□□□□ -0.27
TIMP3-201ENST00000266085 ZNF426Q9BUY5 554 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 Q9N2K0 584 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 MYO7BQ6PIF6 2116 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 DOCK4Q8N1I0 1966 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 ABCA4P78363 2273 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 TRBV5-7A0A0A0MS05 114 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 CELA3AP09093 270 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 CFHR1Q03591 330 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 ADAD2Q8NCV1 583 aaKnown RBP13.36□□□□□ -0.27
TIMP3-201ENST00000266085 SAT2Q96F10 170 aaPredicted RBP13.36□□□□□ -0.27
TIMP3-201ENST00000266085 DHRS9Q9BPW9 319 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 NPTNQ9Y639 398 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 THADAQ6YHU6 1953 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 VAX1Q5SQQ9 334 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 OR4D10Q8NGI6 311 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 FAM206AQ9NX38 181 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 CLN8Q9UBY8 286 aa13.36□□□□□ -0.27
TIMP3-201ENST00000266085 KIF26BQ2KJY2 2108 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 NQO2P16083 231 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 CTSSP25774 331 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 Q56UQ5 140 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 ZNF429Q86V71 674 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 SLC45A2Q9UMX9 530 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 SEMA7AO75326 666 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 UMODP07911 640 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 PRDX2P32119 198 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 CDC34P49427 236 aaPredicted RBP13.35□□□□□ -0.27
TIMP3-201ENST00000266085 RHOBP62745 196 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 RPL31P62899 125 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms