RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 CALHM1Q8IU99 346 aa19.41■□□□□ 0.7
MCF2L-201ENST00000261963 FREM1Q5H8C1 2179 aa19.4■□□□□ 0.7
MCF2L-201ENST00000261963 DIRAS3O95661 229 aa19.4■□□□□ 0.7
MCF2L-201ENST00000261963 CEACAM6P40199 344 aa19.4■□□□□ 0.7
MCF2L-201ENST00000261963 CLDN18P56856 261 aa19.4■□□□□ 0.7
MCF2L-201ENST00000261963 RND3P61587 244 aa19.4■□□□□ 0.7
MCF2L-201ENST00000261963 ARF1P84077 181 aaKnown RBP19.4■□□□□ 0.7
MCF2L-201ENST00000261963 PDCD1Q15116 288 aa19.4■□□□□ 0.7
MCF2L-201ENST00000261963 HAGHQ16775 308 aa19.4■□□□□ 0.7
MCF2L-201ENST00000261963 NRN1LQ496H8 165 aa19.4■□□□□ 0.7
MCF2L-201ENST00000261963 ABHD5Q8WTS1 349 aa19.4■□□□□ 0.7
MCF2L-201ENST00000261963 FRZBQ92765 325 aa19.4■□□□□ 0.7
MCF2L-201ENST00000261963 NHLH2Q02577 135 aa19.4■□□□□ 0.7
MCF2L-201ENST00000261963 TOMM40LQ969M1 308 aa19.4■□□□□ 0.7
MCF2L-201ENST00000261963 SLC25A31Q9H0C2 315 aa19.4■□□□□ 0.7
MCF2L-201ENST00000261963 ZNHIT1O43257 154 aa19.39■□□□□ 0.69
MCF2L-201ENST00000261963 PIGPP57054 158 aa19.39■□□□□ 0.69
MCF2L-201ENST00000261963 DPPA2Q7Z7J5 298 aa19.39■□□□□ 0.69
MCF2L-201ENST00000261963 NIPSNAP3BQ9BS92 247 aa19.39■□□□□ 0.69
MCF2L-201ENST00000261963 LNP1A1A4G5 178 aa19.39■□□□□ 0.69
MCF2L-201ENST00000261963 FOXG1P55316 489 aaPredicted RBP19.39■□□□□ 0.69
MCF2L-201ENST00000261963 C9orf135Q5VTT2 229 aa19.39■□□□□ 0.69
MCF2L-201ENST00000261963 LINC00470Q9BZP3 86 aa19.39■□□□□ 0.69
MCF2L-201ENST00000261963 SHANK1Q9Y566 2161 aa19.38■□□□□ 0.69
MCF2L-201ENST00000261963 PHOX2AO14813 284 aa19.38■□□□□ 0.69
MCF2L-201ENST00000261963 PDCD6O75340 191 aa19.38■□□□□ 0.69
MCF2L-201ENST00000261963 ZNF728P0DKX0 622 aa19.38■□□□□ 0.69
MCF2L-201ENST00000261963 RBM11P57052 281 aaKnown RBP19.38■□□□□ 0.69
MCF2L-201ENST00000261963 OR8G5Q8NG78 346 aa19.38■□□□□ 0.69
MCF2L-201ENST00000261963 RAB24Q969Q5 203 aa19.38■□□□□ 0.69
MCF2L-201ENST00000261963 HIST1H2BLQ99880 126 aa19.38■□□□□ 0.69
MCF2L-201ENST00000261963 WASF3Q9UPY6 502 aa19.38■□□□□ 0.69
MCF2L-201ENST00000261963 A8MWP6 167 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 IL13RA2Q14627 380 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 OR8G1Q15617 311 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 ABHD17BQ5VST6 288 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 TUSC5Q8IXB3 177 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 FAM210BQ96KR6 192 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 NOL4LQ96MY1 436 aaPredicted RBP19.37■□□□□ 0.69
MCF2L-201ENST00000261963 TECTBQ96PL2 329 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 CRIM1Q9NZV1 1036 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 KIAA1456Q9P272 454 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 RCL1Q9Y2P8 373 aaKnown RBP19.37■□□□□ 0.69
MCF2L-201ENST00000261963 A0A096LPE4 126 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 A0A1W2PPZ6 126 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 FAM166BA8MTA8 275 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 FGF7P21781 194 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 NPBWR2P48146 333 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 SPSB3Q6PJ21 355 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 BATF2Q8N1L9 274 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 ZNF611Q8N823 705 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 OR2G3Q8NGZ4 309 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 LIPGQ9Y5X9 500 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 CELSR3Q9NYQ7 3312 aa19.37■□□□□ 0.69
MCF2L-201ENST00000261963 MAGEA5P43359 124 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 CASP6P55212 293 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 NUTF2P61970 127 aaKnown RBP19.36■□□□□ 0.69
MCF2L-201ENST00000261963 TMEM187Q14656 261 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 SP6Q3SY56 376 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 SLC25A26Q70HW3 274 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 MRPL37Q9BZE1 423 aaKnown RBP19.36■□□□□ 0.69
MCF2L-201ENST00000261963 FGF23Q9GZV9 251 aaPredicted RBP19.36■□□□□ 0.69
MCF2L-201ENST00000261963 NAA60Q9H7X0 242 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 ZNF503-AS2A6NEH8 195 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 TGOLN2O43493 480 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 HLA-HP01893 362 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 FXYD4P59646 89 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 OR1C1Q15619 314 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 SLC35E3Q7Z769 313 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 CYB561D1Q8N8Q1 229 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 ZFP62Q8NB50 900 aaPredicted RBP19.36■□□□□ 0.69
MCF2L-201ENST00000261963 NDUFAF3Q9BU61 184 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 CALHM2Q9HA72 323 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 PLA2G3Q9NZ20 509 aa19.36■□□□□ 0.69
MCF2L-201ENST00000261963 KNTC1P50748 2209 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 JOSD1Q15040 202 aaPredicted RBP19.35■□□□□ 0.69
MCF2L-201ENST00000261963 C1orf87Q8N0U7 546 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 OR56B2PQ8NGI1 322 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 RTN4IP1Q8WWV3 396 aaPredicted RBP19.35■□□□□ 0.69
MCF2L-201ENST00000261963 TTTY12Q9BZ98 90 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 ZNF286AQ9HBT8 521 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 B4GALT7Q9UBV7 327 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 WSB1Q9Y6I7 421 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 HSPB1P04792 205 aaKnown RBP19.35■□□□□ 0.69
MCF2L-201ENST00000261963 SNRPCP09234 159 aaKnown RBP19.35■□□□□ 0.69
MCF2L-201ENST00000261963 OR5AC1P0C628 307 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 CCL2P13500 99 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 MALLQ13021 153 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 C4orf17Q53FE4 359 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 DCAF10Q5QP82 559 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 REPIN1Q9BWE0 567 aaKnown RBP19.35■□□□□ 0.69
MCF2L-201ENST00000261963 PRRG4Q9BZD6 226 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 PPP1R14DQ9NXH3 145 aa19.35■□□□□ 0.69
MCF2L-201ENST00000261963 CDRT15L2A8MXV6 281 aa19.34■□□□□ 0.69
MCF2L-201ENST00000261963 DVL1O14640 695 aa19.34■□□□□ 0.69
MCF2L-201ENST00000261963 ST8SIA3O43173 380 aa19.34■□□□□ 0.69
MCF2L-201ENST00000261963 SCAF4O95104 1147 aaKnown RBP19.34■□□□□ 0.69
MCF2L-201ENST00000261963 RELQ04864 619 aaPredicted RBP19.34■□□□□ 0.69
MCF2L-201ENST00000261963 ICAM4Q14773 271 aa19.34■□□□□ 0.69
MCF2L-201ENST00000261963 FBXW12Q6X9E4 464 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms