RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 MRPL30Q8TCC3 161 aaKnown RBP14.02□□□□□ -0.16
HOXD3-201ENST00000249440 TMEM171Q8WVE6 324 aa14.02□□□□□ -0.16
HOXD3-201ENST00000249440 HIST1H2BAQ96A08 127 aa14.02□□□□□ -0.16
HOXD3-201ENST00000249440 TRBV6-6A0A0A6YYG2 114 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 MED19A0JLT2 244 aaPredicted RBP14.02□□□□□ -0.17
HOXD3-201ENST00000249440 C1orf196B1AJZ1 125 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 C21orf140B9A014 251 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 WRBO00258 174 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 PGLYRP1O75594 196 aaPredicted RBP14.02□□□□□ -0.17
HOXD3-201ENST00000249440 APLNRP35414 380 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 PPP1CCP36873 323 aaKnown RBP14.02□□□□□ -0.17
HOXD3-201ENST00000249440 GNG3P63215 75 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 HABP2Q14520 560 aaPredicted RBP14.02□□□□□ -0.17
HOXD3-201ENST00000249440 RHEBQ15382 184 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 DCAF10Q5QP82 559 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 PCSK4Q6UW60 755 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 OR8G5Q8NG78 346 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 OR1J1Q8NGS3 322 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 CD300LFQ8TDQ1 290 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 SFT2D1Q8WV19 159 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 C12orf57Q99622 126 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 PLA2G3Q9NZ20 509 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 FOXJ2Q9P0K8 574 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 ARHGAP21Q5T5U3 1957 aa14.02□□□□□ -0.17
HOXD3-201ENST00000249440 DOCK7Q96N67 2140 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 A0A1B0GV50 99 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 HS3ST1O14792 307 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 TCF15Q12870 199 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 LINC00696Q6ZRV3 163 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 ZFP62Q8NB50 900 aaPredicted RBP14.01□□□□□ -0.17
HOXD3-201ENST00000249440 OR10J5Q8NHC4 309 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 GNPNAT1Q96EK6 184 aaPredicted RBP14.01□□□□□ -0.17
HOXD3-201ENST00000249440 C20orf24Q9BUV8 137 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 COA4Q9NYJ1 87 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 OR2W1Q9Y3N9 320 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 ESPL1Q14674 2120 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 BTBD17A6NE02 478 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 TNFSF12O43508 249 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 F2RP25116 425 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 IL24Q13007 206 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 C20orf204Q6ZNR8 217 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 FAM58AQ8N1B3 248 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 PRSS33Q8NF86 280 aa14.01□□□□□ -0.17
HOXD3-201ENST00000249440 LNP1A1A4G5 178 aa14□□□□□ -0.17
HOXD3-201ENST00000249440 GPR37O15354 613 aa14□□□□□ -0.17
HOXD3-201ENST00000249440 CHST1O43916 411 aa14□□□□□ -0.17
HOXD3-201ENST00000249440 CST7O76096 145 aa14□□□□□ -0.17
HOXD3-201ENST00000249440 DYNLT3P51808 116 aa14□□□□□ -0.17
HOXD3-201ENST00000249440 CLN3Q13286 438 aa14□□□□□ -0.17
HOXD3-201ENST00000249440 NUFIP2Q7Z417 695 aaKnown RBP14□□□□□ -0.17
HOXD3-201ENST00000249440 ZNF561Q8N587 486 aa14□□□□□ -0.17
HOXD3-201ENST00000249440 PLPPR1Q8TBJ4 325 aa14□□□□□ -0.17
HOXD3-201ENST00000249440 RDH5Q92781 318 aa14□□□□□ -0.17
HOXD3-201ENST00000249440 ZNF488Q96MN9 340 aa14□□□□□ -0.17
HOXD3-201ENST00000249440 GLRX2Q9NS18 164 aa14□□□□□ -0.17
HOXD3-201ENST00000249440 TRAV24A0A0B4J272 114 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 OR13C7P0DN81 318 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 SOHLH1Q5JUK2 328 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 PKIBQ9C010 78 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 FAM186AA6NE01 2351 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 RBFOX3A6NFN3 312 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 TMEM50AO95807 157 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 SULT1A1P50225 295 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 HLA-DRB3P79483 266 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 OR8G1Q15617 311 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 KRBOX4Q5JUW0 171 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 ZNF324BQ6AW86 544 aaPredicted RBP13.99□□□□□ -0.17
HOXD3-201ENST00000249440 ZNF880Q6PDB4 577 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 TMEM217Q8N7C4 229 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 ISOC2Q96AB3 205 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 LRFN3Q9BTN0 628 aa13.99□□□□□ -0.17
HOXD3-201ENST00000249440 UNKLQ9H9P5 680 aaKnown RBP13.99□□□□□ -0.17
HOXD3-201ENST00000249440 S100A6P06703 90 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 SERPINE2P07093 398 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 WNT5AP41221 380 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 SNRPEP62304 92 aaKnown RBP13.98□□□□□ -0.17
HOXD3-201ENST00000249440 ZFHX4Q86UP3 3567 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 ODF3L1Q8IXM7 274 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 H1FOOQ8IZA3 346 aaPredicted RBP13.98□□□□□ -0.17
HOXD3-201ENST00000249440 RARRES2Q99969 163 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 IFT22Q9H7X7 185 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 DLL3Q9NYJ7 618 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 TAAR3PQ9P1P4 343 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 ERRFI1Q9UJM3 462 aaPredicted RBP13.98□□□□□ -0.17
HOXD3-201ENST00000249440 RNF115Q9Y4L5 304 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 RFNGQ9Y644 331 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 MED13Q9UHV7 2174 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 CDRT15L2A8MXV6 281 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 PRR33A8MZF0 331 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 KLRC4-KLRK1H3BQV0 150 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 LILRA1O75019 489 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 SLC25A6P12236 298 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 DAOP14920 347 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 HIKESHIQ53FT3 197 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 NANOS1Q8WY41 292 aaKnown RBP13.98□□□□□ -0.17
HOXD3-201ENST00000249440 CABLES2Q9BTV7 478 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 ABHD14AQ9BUJ0 271 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 KIAA1456Q9P272 454 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 PRSS50Q9UI38 385 aa13.98□□□□□ -0.17
HOXD3-201ENST00000249440 KLF13Q9Y2Y9 288 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms