RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 M0R1X1 148 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 PSG4Q00888 419 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 NSUN5P2Q63ZY6 315 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.94□□□□□ -0.51e-6■■■■■ 26.9
NFKB1-201ENST00000226574 RND3P61587 244 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 PAQR4Q8N4S7 273 aaPredicted RBP11.94□□□□□ -0.5
NFKB1-201ENST00000226574 POC1BQ8TC44 478 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 MUCL1Q96DR8 90 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 ABHD14AQ9BUJ0 271 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 REG4Q9BYZ8 158 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 TREM2Q9NZC2 230 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 CACFD1Q9UGQ2 172 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 SEC14L6B5MCN3 397 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 FAM3AP98173 230 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 RAB40CQ96S21 281 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 TRAPPC1Q9Y5R8 145 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 VSTM5A8MXK1 200 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 PMCHP20382 165 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 TCL1AP56279 114 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 HIST1H3AP68431 136 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 PLAURQ03405 335 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 HIKESHIQ53FT3 197 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 FDX2Q6P4F2 183 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 SSMEM1Q8WWF3 244 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 GDF15Q99988 308 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 TINAGQ9UJW2 476 aa11.94□□□□□ -0.5
NFKB1-201ENST00000226574 IGHV5-10-1A0A0J9YXX1 117 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 YKT6O15498 198 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 PAGE4O60829 102 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 TMEM11P17152 192 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 MNX1P50219 401 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-201ENST00000226574 TDHQ8IZJ6 230 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 SCCPDHQ8NBX0 429 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 CADM4Q8NFZ8 388 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 LILRB1Q8NHL6 650 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-201ENST00000226574 CTDSP1Q9GZU7 261 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 CLCF1Q9UBD9 225 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 PRSS50Q9UI38 385 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 OR5G3P0C626 314 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 PGA5P0DJD9 388 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 ERVFC1-1P60608 527 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 ACOT6Q3I5F7 207 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-201ENST00000226574 POC1AQ8NBT0 407 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 OR4A4PQ8NGN8 299 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 KCNE4Q8WWG9 221 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 BORCS7Q96B45 105 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 DAZAP1Q96EP5 407 aaKnown RBP11.93□□□□□ -0.5
NFKB1-201ENST00000226574 SLX1AQ9BQ83 275 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 OR2H1Q9GZK4 316 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 RFNGQ9Y644 331 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 IGKV1D-8A0A087WSZ0 117 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 C3orf80F5H4A9 247 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 ZNF735P0CB33 412 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 EGR1P18146 543 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 EPHA8P29322 1005 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-201ENST00000226574 ARR3P36575 388 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 OR1C1Q15619 314 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 VOPP1Q96AW1 172 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 B3GAT1Q9P2W7 334 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 GBF1Q92538 1859 aa11.93□□□□□ -0.5
NFKB1-201ENST00000226574 WISP1O95388 367 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 G6PCP35575 357 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 RBMXL3Q8N7X1 1067 aaKnown RBP11.92□□□□□ -0.5
NFKB1-201ENST00000226574 MS4A10Q96PG2 267 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 RTBDNQ9BSG5 229 aaPredicted RBP11.92□□□□□ -0.5
NFKB1-201ENST00000226574 CLN8Q9UBY8 286 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 KIAA1324LA8MWY0 1029 aaPredicted RBP11.92□□□□□ -0.5
NFKB1-201ENST00000226574 SLC25A47Q6Q0C1 308 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 MSI2Q96DH6 328 aaKnown RBP11.92□□□□□ -0.5
NFKB1-201ENST00000226574 TP53RKQ96S44 253 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 GPR87Q9BY21 358 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 TMEM38BQ9NVV0 291 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 TRDCB7Z8K6 153 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 SYNGR1O43759 233 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 FAM3BP58499 235 aaPredicted RBP11.92□□□□□ -0.5
NFKB1-201ENST00000226574 ZP4Q12836 540 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 IL24Q13007 206 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 PHYHD1Q5SRE7 291 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 DHRS13Q6UX07 377 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 ATP5SQ99766 215 aa11.92□□□□□ -0.5
NFKB1-201ENST00000226574 A0A1B0GTI1 187 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 SLC22A20A6NK97 555 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 TGOLN2O43493 480 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 ZIC3O60481 467 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 CDS2O95674 445 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 SLC35B1P78383 322 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 C5orf24Q7Z6I8 188 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 ACY3Q96HD9 319 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 TAAR3PQ9P1P4 343 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 E9PQ18 207 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 MAGEA5P43359 124 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 PPP1CBP62140 327 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 IGLV3-21P80748 117 aaPredicted RBP11.91□□□□□ -0.5
NFKB1-201ENST00000226574 RNF151Q2KHN1 245 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 BTNL8Q6UX41 500 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 BIVMQ86UB2 503 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 SMRP1Q8NCR6 262 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 DMRTA2Q96SC8 542 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 CRYM-AS1A6NIL9 109 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 OR5H1A6NKK0 313 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms