RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 GTF3AQ92664 365 aaKnown RBP18.94■□□□□ 0.62
HTATSF1-201ENST00000218364 BCL2L14Q9BZR8 327 aa18.94■□□□□ 0.62
HTATSF1-201ENST00000218364 HLA-BQ31612 363 aa18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 PYY3Q5JQD4 70 aa18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 OR13D1Q8NGV5 346 aa18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 FSCN3Q9NQT6 498 aa18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 MTCH1Q9NZJ7 389 aa18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 KIAA1324LA8MWY0 1029 aaPredicted RBP18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 F2RP25116 425 aa18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 HLA-DRB3P79483 266 aa18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 CEACAM21Q3KPI0 293 aa18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 PCSK4Q6UW60 755 aa18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 ZNF295-AS1Q8N0V1 137 aa18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 MRPS18CQ9Y3D5 142 aaKnown RBP18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 WIPI1Q5MNZ9 446 aaPredicted RBP18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 STX12Q86Y82 276 aa18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 RIMS4Q9H426 269 aaPredicted RBP18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 GAR1Q9NY12 217 aaKnown RBP18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 CRIM1Q9NZV1 1036 aa18.93■□□□□ 0.62
HTATSF1-201ENST00000218364 TGIF2-C20orf24A0A0A6YYL0 155 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 PIGBOS1A0A0B4J2F0 54 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 A0A1B0GU03 582 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 GATCO43716 136 aaKnown RBP18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 RPS18P62269 152 aaKnown RBP18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 ABHD3Q8WU67 409 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 IL36RNQ9UBH0 155 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 SDK1Q7Z5N4 2213 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 TRBV6-6A0A0A6YYG2 114 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 CCDC163A0A0D9SF12 145 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 A0A0G2JRQ6 117 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 NXPH3O95157 252 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 WNT2P09544 360 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 CCL4P13236 92 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 S100A2P29034 98 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 FOLR3P41439 243 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 GPM6AP51674 278 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 MKXQ8IYA7 352 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 ZDHHC23Q8IYP9 409 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 H1FOOQ8IZA3 346 aaPredicted RBP18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 GPR146Q96CH1 333 aa18.92■□□□□ 0.62
HTATSF1-201ENST00000218364 ZNF729A6NN14 1252 aaPredicted RBP18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 HIST1H2BKO60814 126 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 HIST1H2BJP06899 126 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 HIST1H2BOP23527 126 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 HIST1H2BBP33778 126 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 HIST1H2BDP58876 126 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 HIST1H2BCP62807 126 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 HIST2H2BEQ16778 126 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 HIST1H2BHQ93079 126 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 RAB40CQ96S21 281 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 HIST1H2BNQ99877 126 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 HIST1H2BMQ99879 126 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 SEC14L6B5MCN3 397 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 IFNA5P01569 189 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 OR2B11Q5JQS5 317 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 THNSL2Q86YJ6 484 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 MRPL30Q8TCC3 161 aaKnown RBP18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 URGCP-MRPS24S4R325 110 aa18.91■□□□□ 0.62
HTATSF1-201ENST00000218364 TRBV23-1A0A0A0MS06 115 aa18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 TRAPPC2LH3BP13 241 aa18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 SLC33A1O00400 549 aaPredicted RBP18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 TRA2AQ13595 282 aaKnown RBP eCLIP18.9■□□□□ 0.623e-8■■■■□ 26.3
HTATSF1-201ENST00000218364 CACNA1EQ15878 2313 aa18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 FAM90A2PQ658T7 463 aa18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 ZNF324BQ6AW86 544 aaPredicted RBP18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 UBALD2Q8IYN6 164 aa18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 ZNF845Q96IR2 970 aaPredicted RBP18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 TMEM242Q9NWH2 141 aa18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 CISD1Q9NZ45 108 aaKnown RBP18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 TREM2Q9NZC2 230 aa18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 TNFSF12O43508 249 aa18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 SLC23A3Q6PIS1 610 aa18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 NEK7Q8TDX7 302 aa18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 LINC00470Q9BZP3 86 aa18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 TNRC6BQ9UPQ9 1833 aaKnown RBP18.9■□□□□ 0.62
HTATSF1-201ENST00000218364 TRAPPC6AO75865 159 aa18.89■□□□□ 0.62
HTATSF1-201ENST00000218364 S100GP29377 79 aa18.89■□□□□ 0.62
HTATSF1-201ENST00000218364 SPNS3Q6ZMD2 512 aa18.89■□□□□ 0.62
HTATSF1-201ENST00000218364 LINC00596Q86U02 117 aa18.89■□□□□ 0.62
HTATSF1-201ENST00000218364 OR2W1Q9Y3N9 320 aa18.89■□□□□ 0.62
HTATSF1-201ENST00000218364 CYB5BO43169 146 aa18.89■□□□□ 0.61
HTATSF1-201ENST00000218364 CD200P41217 278 aa18.89■□□□□ 0.61
HTATSF1-201ENST00000218364 GFRA1P56159 465 aa18.89■□□□□ 0.61
HTATSF1-201ENST00000218364 MBD3L1Q8WWY6 194 aa18.89■□□□□ 0.61
HTATSF1-201ENST00000218364 IGKV3D-15A0A087WSY6 115 aa18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 NTN3O00634 580 aaPredicted RBP18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 HSPB6O14558 160 aa18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 SS18L1O75177 396 aaPredicted RBP18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 F10P00742 488 aa18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 COX5BP10606 129 aa18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 RND2P52198 227 aa18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 ARF1P84077 181 aaKnown RBP18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 ZFP36L1Q07352 338 aaKnown RBP18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 PNRC1Q12796 327 aaPredicted RBP18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 ZNF880Q6PDB4 577 aa18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 MRPL21Q7Z2W9 205 aaKnown RBP18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 P4HA3Q7Z4N8 544 aa18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 PLK3Q9H4B4 646 aa18.88■□□□□ 0.61
HTATSF1-201ENST00000218364 NCKAP5O14513 1909 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms