RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 CHST6Q9GZX3 395 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 DNTTIP1Q9H147 329 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 PPA2Q9H2U2 334 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 AUNIPQ9H7T9 357 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 ZMAT3Q9HA38 289 aaKnown RBP7.8□□□□□ -1.16
PHGDH-228ENST00000641847 PLEKHJ1Q9NW61 149 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 HSF4Q9ULV5 492 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 CMYA5Q8N3K9 4069 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 YLPM1P49750 1951 aaKnown RBP7.79□□□□□ -1.16
PHGDH-228ENST00000641847 UBE2QL1A1L167 161 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 CEACAM18A8MTB9 384 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 SERPINE3A8MV23 424 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 MCRIP1C9JLW8 97 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 SIGLEC5O15389 551 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 ADAM20O43506 726 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 PSPNO60542 156 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 ZNF737O75373 536 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 GSTP1P09211 210 aaKnown RBP7.79□□□□□ -1.16
PHGDH-228ENST00000641847 PTHLHP12272 177 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 SELLP14151 372 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 RPS2P15880 293 aaKnown RBP7.79□□□□□ -1.16
PHGDH-228ENST00000641847 LMO1P25800 156 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 GIFP27352 417 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 DVL1P1P54792 670 aaPredicted RBP7.79□□□□□ -1.16
PHGDH-228ENST00000641847 GNG2P59768 71 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 IL13RA1P78552 427 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 PITPNAQ00169 270 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 FOXL1Q12952 345 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 RBM39Q14498 530 aaKnown RBP7.79□□□□□ -1.16
PHGDH-228ENST00000641847 ZNF846Q147U1 533 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 ARL6IP1Q15041 203 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 GRK1Q15835 563 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 ZNF79Q15937 498 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 PNLIPRP3Q17RR3 467 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 CDNFQ49AH0 187 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 TMEM155Q4W5P6 130 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 PYDC2Q56P42 97 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 RNASE12Q5GAN4 147 aaKnown RBP7.79□□□□□ -1.16
PHGDH-228ENST00000641847 ATPAF1Q5TC12 328 aaPredicted RBP7.79□□□□□ -1.16
PHGDH-228ENST00000641847 LYPD2Q6UXB3 125 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 C17orf107Q6ZR85 190 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 DCDC5Q6ZRR9 648 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 SLC36A1Q7Z2H8 476 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 GLCCI1Q86VQ1 547 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 BPIFB2Q8N4F0 458 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 ZNF561Q8N587 486 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 TMEM185AQ8NFB2 350 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 OR4S1Q8NGB4 309 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 PPP1R35Q8TAP8 253 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 ZDHHC16Q969W1 377 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 SNX22Q96L94 193 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 SOSTQ9BQB4 213 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 FAAP24Q9BTP7 215 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 WDR12Q9GZL7 423 aaKnown RBP7.79□□□□□ -1.16
PHGDH-228ENST00000641847 NARFLQ9H6Q4 476 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 SEBOXQ9HB31 216 aaPredicted RBP7.79□□□□□ -1.16
PHGDH-228ENST00000641847 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.79□□□□□ -1.16
PHGDH-228ENST00000641847 ETAA1Q9NY74 926 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 RABL2AQ9UBK7 228 aaPredicted RBP7.79□□□□□ -1.16
PHGDH-228ENST00000641847 CTSZQ9UBR2 303 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 AK3Q9UIJ7 227 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 ELF5Q9UKW6 265 aaPredicted RBP7.79□□□□□ -1.16
PHGDH-228ENST00000641847 RABL2BQ9UNT1 228 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 KCNK7Q9Y2U2 307 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 MAB21L2Q9Y586 359 aa7.79□□□□□ -1.16
PHGDH-228ENST00000641847 KMT2CQ8NEZ4 4911 aaKnown RBP7.78□□□□□ -1.16
PHGDH-228ENST00000641847 TNFRSF13BO14836 293 aaPredicted RBP7.78□□□□□ -1.16
PHGDH-228ENST00000641847 NDUFA2O43678 99 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 TPPPO94811 219 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 HLA-DQB1P01920 261 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 TK1P04183 234 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 GLAP06280 429 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 CD3GP09693 182 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 PTBP1P26599 531 aaKnown RBP eCLIP7.78□□□□□ -1.16
PHGDH-228ENST00000641847 HILS1P60008 231 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 DGCR2P98153 550 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 ZNF45Q02386 682 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 GUCA2AQ02747 115 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 EDDM3AQ14507 147 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 HACD4Q5VWC8 232 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 OR8H2Q8N162 312 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 ZNRF1Q8ND25 227 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 PLPPR1Q8TBJ4 325 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 C15orf40Q8WUR7 153 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 NUDCD2Q8WVJ2 157 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 ABHD1Q96SE0 405 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 CMSS1Q9BQ75 279 aaKnown RBP7.78□□□□□ -1.16
PHGDH-228ENST00000641847 HDHD3Q9BSH5 251 aaPredicted RBP7.78□□□□□ -1.16
PHGDH-228ENST00000641847 SRRQ9GZT4 340 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 FAM234AQ9H0X4 552 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 CHMP1AQ9HD42 196 aaPredicted RBP7.78□□□□□ -1.16
PHGDH-228ENST00000641847 C12orf4Q9NQ89 552 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 ING3Q9NXR8 418 aa7.78□□□□□ -1.16
PHGDH-228ENST00000641847 WNK1Q9H4A3 2382 aa7.77□□□□□ -1.17
PHGDH-228ENST00000641847 TMEM30CPA0ZSE6 113 aa7.77□□□□□ -1.17
PHGDH-228ENST00000641847 B4DSR2 109 aa7.77□□□□□ -1.17
PHGDH-228ENST00000641847 F5H0A9 414 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-228ENST00000641847 K7N7A8 449 aa7.77□□□□□ -1.17
PHGDH-228ENST00000641847 MGST3O14880 152 aa7.77□□□□□ -1.17
PHGDH-228ENST00000641847 CTDSPLO15194 276 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms