RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 DNAJB11Q9UBS4 358 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 PPP1R3CQ9UQK1 317 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 NPTNQ9Y639 398 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 HRNRQ86YZ3 2850 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-221ENST00000641573 IGHV3OR15-7A0A075B7D8 119 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 TRBV6-6A0A0A6YYG2 114 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 A0A0A6YYJ9 748 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 C7orf66A4D0T2 115 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 CYB5R3P00387 301 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-221ENST00000641573 RLN1P04808 185 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 PSG2P11465 335 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 IRF2P14316 349 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 PRDX2P32119 198 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 MECP2P51608 486 aaKnown RBP10.98□□□□□ -0.65
PHGDH-221ENST00000641573 SNRPD2P62316 118 aaKnown RBP10.98□□□□□ -0.65
PHGDH-221ENST00000641573 COL10A1Q03692 680 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 GRK1Q15835 563 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 Q6ZS49 121 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 OVCH2Q7RTZ1 564 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 TMEM17Q86X19 198 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 CD177Q8N6Q3 437 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 OR5T2Q8NGG2 359 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 GIMAP1Q8WWP7 306 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 HPS1Q92902 700 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 SMR3AQ99954 134 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 NEURL2Q9BR09 285 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 SAP30LQ9HAJ7 183 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 SEBOXQ9HB31 216 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-221ENST00000641573 TMEM165Q9HC07 324 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 METRNQ9UJH8 293 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 CSPG4Q6UVK1 2322 aa10.98□□□□□ -0.65
PHGDH-221ENST00000641573 AKAP6Q13023 2319 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 STAB1Q9NY15 2570 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 TMEM82A0PJX8 343 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 HMX3A6NHT5 357 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 LRRC30A6NM36 301 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 OR2AT4A6NND4 320 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 KIAA1324LA8MWY0 1029 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-221ENST00000641573 H7C1Q1 480 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 PSPNO60542 156 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 PRAF2O60831 178 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 IL5P05113 134 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 GSTT2P0CG29 244 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 ANXA7P20073 488 aaKnown RBP10.97□□□□□ -0.65
PHGDH-221ENST00000641573 ATXN7L3Q14CW9 347 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-221ENST00000641573 FAM201AQ5SY85 155 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 ZNF880Q6PDB4 577 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 ZNF497Q6ZNH5 498 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 TERB2Q8NHR7 220 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 MRGPRFQ96AM1 343 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 DACT3Q96B18 629 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-221ENST00000641573 CLEC4MQ9H2X3 399 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-221ENST00000641573 GHITMQ9H3K2 345 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 LIME1Q9H400 295 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 NECAP2Q9NVZ3 263 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 ING3Q9NXR8 418 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 VSIG4Q9Y279 399 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 COL6A5A8TX70 2615 aa10.97□□□□□ -0.65
PHGDH-221ENST00000641573 IGKV1D-17A0A075B6S4 117 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 TMEM30CPA0ZSE6 113 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 POM121CA8CG34 1229 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 TRDCB7Z8K6 153 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 OR5H8P0DN80 308 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 VSIG10L2P0DP72 767 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 GABRA2P47869 451 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 OR3A1P47881 315 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 KCNJ3P48549 501 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 ATPAF1Q5TC12 328 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-221ENST00000641573 C20orf204Q6ZNR8 217 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 SLC36A1Q7Z2H8 476 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 LHFPL1Q86WI0 220 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 GAPTQ8N292 157 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 ZDHHC22Q8N966 263 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 CCDC107Q8WV48 283 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 SEC22CQ9BRL7 303 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 OR51J1Q9H342 316 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 DCAF16Q9NXF7 216 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 ZNF222Q9UK12 451 aa10.96□□□□□ -0.65
PHGDH-221ENST00000641573 KIR2DS1A0A191URI9 304 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 FABP7O15540 132 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 ZNF737O75373 536 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 ZNF205O95201 554 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 HEXAP06865 529 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 TRAPPC2P0DI81 140 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 TRAPPC2BP0DI82 140 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 KIR2DS4P43632 304 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 PPOXP50336 477 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 NPY4RP50391 375 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 HLA-DRB3P79483 266 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 CBX3Q13185 183 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 KIR2DS1Q14954 304 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 METTL11BQ5VVY1 283 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 SLC35E4Q6ICL7 350 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 GLDNQ6ZMI3 551 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-221ENST00000641573 C17orf107Q6ZR85 190 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 MOB1BQ7L9L4 216 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 C5orf24Q7Z6I8 188 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 TMED4Q7Z7H5 227 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 ZNF554Q86TJ5 538 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 AKAP14Q86UN6 197 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms