RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 MEX3AA1L020 520 aaKnown RBP18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 ARPC5O15511 151 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 ATP6V1G1O75348 118 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 KIR2DS4P43632 304 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 HLA-DRB3P79483 266 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 KIR2DS1Q14954 304 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 ZNF880Q6PDB4 577 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 GPHA2Q96T91 129 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 IGKV1D-13A0A0B4J2D9 117 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 C5orf51A6NDU8 294 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 CRYM-AS1A6NIL9 109 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 GLAP06280 429 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 IGKV1-13P0DP09 117 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 SRSF7Q16629 238 aaKnown RBP eCLIP18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 ABCA11PQ4W5N1 156 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 KDF1Q8NAX2 398 aaPredicted RBP18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 NUP37Q8NFH4 326 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 RIMS4Q9H426 269 aaPredicted RBP18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 SLA2Q9H6Q3 261 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 SLC2A9Q9NRM0 540 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 RASL12Q9NYN1 266 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 TRAPPC2LQ9UL33 140 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 COL6A6A6NMZ7 2263 aa18.22■□□□□ 0.51
CHRNA7-228ENST00000637519 TRBV6-6A0A0A6YYG2 114 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 TK1P04183 234 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 FAM201AQ5SY85 155 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 PCSK4Q6UW60 755 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 SECTM1Q8WVN6 248 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 RDH8Q9NYR8 311 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 OR1A1Q9P1Q5 309 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 IFNA2P01563 188 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 IGHV1-46P01743 117 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 HLA-GP17693 338 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 COL10A1Q03692 680 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 SMIM21Q3B7S5 101 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 LPCAT3Q6P1A2 487 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 SGPP2Q8IWX5 399 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 GCSAMQ8N6F7 178 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 CD177Q8N6Q3 437 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 TPRX1Q8N7U7 411 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 COQ8AQ8NI60 647 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 PPP1R1CQ8WVI7 109 aa18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 RTN4IP1Q8WWV3 396 aaPredicted RBP18.21■□□□□ 0.51
CHRNA7-228ENST00000637519 HOXB5P09067 269 aa18.2■□□□□ 0.5
CHRNA7-228ENST00000637519 OR4A8P0C604 315 aa18.2■□□□□ 0.5
CHRNA7-228ENST00000637519 MDH2P40926 338 aaKnown RBP18.2■□□□□ 0.5
CHRNA7-228ENST00000637519 ADORA2A-AS1P86434 159 aa18.2■□□□□ 0.5
CHRNA7-228ENST00000637519 AESQ08117 197 aa18.2■□□□□ 0.5
CHRNA7-228ENST00000637519 ADIPOQQ15848 244 aa18.2■□□□□ 0.5
CHRNA7-228ENST00000637519 LDLRAD3Q86YD5 345 aa18.2■□□□□ 0.5
CHRNA7-228ENST00000637519 TGIF2LYQ8IUE0 185 aa18.2■□□□□ 0.5
CHRNA7-228ENST00000637519 ZCCHC24Q8N2G6 241 aaKnown RBP18.2■□□□□ 0.5
CHRNA7-228ENST00000637519 NEUROG1Q92886 237 aa18.2■□□□□ 0.5
CHRNA7-228ENST00000637519 GON7Q9BXV9 100 aa18.2■□□□□ 0.5
CHRNA7-228ENST00000637519 ROS1P08922 2347 aa18.2■□□□□ 0.5
CHRNA7-228ENST00000637519 OR5AC1P0C628 307 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 ASCL1P50553 236 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 SELENOVP59797 346 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 MZT1Q08AG7 82 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 LINC01560Q8TB33 94 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 DHRS9Q9BPW9 319 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 SRRM5B3KS81 715 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 RGS11O94810 467 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 CD8AP01732 235 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 SLC38A6Q8IZM9 456 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 COQ2Q96H96 371 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 NAA60Q9H7X0 242 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 HEXA-AS1Q9H8Q6 139 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 CACNA1DQ01668 2161 aa18.19■□□□□ 0.5
CHRNA7-228ENST00000637519 TPRP12270 2363 aaKnown RBP18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 DIRAS3O95661 229 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 LMO1P25800 156 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 GNRHRP30968 328 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 OR3A1P47881 315 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 TNFAIP6P98066 277 aaPredicted RBP18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 SRSF4Q08170 494 aaKnown RBP18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 SHEQ5VZ18 495 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 ZNF818PQ6ZRF7 136 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 SLC7A5P1Q8MH63 180 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 OR10C1Q96KK4 312 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 RSRP1Q9BUV0 290 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 GLS2Q9UI32 602 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 KIF25Q9UIL4 384 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 PKD1L2Q7Z442 2459 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 HSD17B6O14756 317 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 TUSC2O75896 110 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 MPC2O95563 127 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 PSG2P11465 335 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 C1QTNF12Q5T7M4 302 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 FAM53AQ6NSI3 398 aaPredicted RBP18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 GSG1LQ6UXU4 331 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 GAPTQ8N292 157 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 OR4A4PQ8NGN8 299 aa18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 METTL8Q9H825 291 aaKnown RBP18.18■□□□□ 0.5
CHRNA7-228ENST00000637519 IGKV1D-17A0A075B6S4 117 aa18.17■□□□□ 0.5
CHRNA7-228ENST00000637519 L7N2F9 121 aa18.17■□□□□ 0.5
CHRNA7-228ENST00000637519 AP2S1P53680 142 aaPredicted RBP18.17■□□□□ 0.5
CHRNA7-228ENST00000637519 UCP3P55916 312 aa18.17■□□□□ 0.5
CHRNA7-228ENST00000637519 DMRTC2Q8IXT2 367 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms