RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 STX12Q86Y82 276 aa13.05□□□□□ -0.32
LINC00552-201ENST00000625151 SUMF2Q8NBJ7 301 aa13.05□□□□□ -0.32
LINC00552-201ENST00000625151 SEBOXQ9HB31 216 aaPredicted RBP13.05□□□□□ -0.32
LINC00552-201ENST00000625151 R4GN57 208 aa13.05□□□□□ -0.32
LINC00552-201ENST00000625151 PINLYPA6NC86 204 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 RBFOX3A6NFN3 312 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 SLC22A20A6NK97 555 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 NTN3O00634 580 aaPredicted RBP13.04□□□□□ -0.32
LINC00552-201ENST00000625151 NAPSAO96009 420 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 TK1P04183 234 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 OR8U8P0C7N1 319 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 CCL2P13500 99 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 EPHA1P21709 976 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 CCNOP22674 350 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 GPM6AP51674 278 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 ZFP36L1Q07352 338 aaKnown RBP13.04□□□□□ -0.32
LINC00552-201ENST00000625151 C9orf135Q5VTT2 229 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 COLCA1Q6ZS62 124 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 SIGLEC12Q96PQ1 595 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 HSD17B6O14756 317 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 CYTIPO60759 359 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 NQO2P16083 231 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 OTX2P32243 289 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 DYNLT3P51808 116 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 RND3P61587 244 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 NMSQ5H8A3 153 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 TMEM217Q8N7C4 229 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 MALSU1Q96EH3 234 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 SPIN2AQ99865 258 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 SPIN2BQ9BPZ2 258 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 ARRDC1-AS1Q9H2J1 176 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 PCSK5Q92824 1860 aa13.04□□□□□ -0.32
LINC00552-201ENST00000625151 IGKV1-6A0A0C4DH72 117 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 S100A9P06702 114 aaKnown RBP13.03□□□□□ -0.32
LINC00552-201ENST00000625151 GDF1P27539 372 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 VAMP2P63027 116 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 RUNX1Q01196 453 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 PRDX4Q13162 271 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 PPP1R32Q7Z5V6 425 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 PLPPR1Q8TBJ4 325 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 YPEL4Q96NS1 127 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 CCL28Q9NRJ3 127 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 TNRC6AQ8NDV7 1962 aaKnown RBP13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A10PA6NDY2 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A18PA6NE21 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A16PA6NEW6 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A20PA6NIJ5 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A8PA6NJQ4 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A7PA6NKC0 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A22PA8MWA6 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A12PA8MX19 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A5PA8MXJ8 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A23PA8MXZ1 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 NDUFS6O75380 124 aaKnown RBP13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A15PP0C7V4 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A13PP0C7W8 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A14PP0C7W9 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FAM90A24PP0C7X0 464 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 FGF12P61328 243 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 RAB1AP62820 205 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 HAGHQ16775 308 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 SLC25A31Q9H0C2 315 aa13.03□□□□□ -0.32
LINC00552-201ENST00000625151 ESPL1Q14674 2120 aa13.02□□□□□ -0.32
LINC00552-201ENST00000625151 A0A096LPE4 126 aa13.02□□□□□ -0.32
LINC00552-201ENST00000625151 A0A1W2PPZ6 126 aa13.02□□□□□ -0.32
LINC00552-201ENST00000625151 TNFSF12O43508 249 aa13.02□□□□□ -0.32
LINC00552-201ENST00000625151 OR2C1O95371 312 aa13.02□□□□□ -0.32
LINC00552-201ENST00000625151 UCP1P25874 307 aa13.02□□□□□ -0.32
LINC00552-201ENST00000625151 HIKESHIQ53FT3 197 aa13.02□□□□□ -0.32
LINC00552-201ENST00000625151 ZNF251Q9BRH9 671 aa13.02□□□□□ -0.32
LINC00552-201ENST00000625151 REPIN1Q9BWE0 567 aaKnown RBP13.02□□□□□ -0.32
LINC00552-201ENST00000625151 SMDT1Q9H4I9 107 aa13.02□□□□□ -0.32
LINC00552-201ENST00000625151 MTCH1Q9NZJ7 389 aa13.02□□□□□ -0.32
LINC00552-201ENST00000625151 LIPGQ9Y5X9 500 aa13.02□□□□□ -0.32
LINC00552-201ENST00000625151 CLEC18AA5D8T8 446 aa13.02□□□□□ -0.33
LINC00552-201ENST00000625151 TUSC2O75896 110 aa13.02□□□□□ -0.33
LINC00552-201ENST00000625151 MAS1LP35410 378 aa13.02□□□□□ -0.33
LINC00552-201ENST00000625151 CEBPGP53567 150 aa13.02□□□□□ -0.33
LINC00552-201ENST00000625151 GFRA1P56159 465 aa13.02□□□□□ -0.33
LINC00552-201ENST00000625151 ID3Q02535 119 aa13.02□□□□□ -0.33
LINC00552-201ENST00000625151 TRA2AQ13595 282 aaKnown RBP eCLIP13.02□□□□□ -0.33
LINC00552-201ENST00000625151 SP5Q6BEB4 398 aaPredicted RBP13.02□□□□□ -0.33
LINC00552-201ENST00000625151 BEND4Q6ZU67 534 aa13.02□□□□□ -0.33
LINC00552-201ENST00000625151 CLEC18CQ8NCF0 446 aa13.02□□□□□ -0.33
LINC00552-201ENST00000625151 CPNE4Q96A23 557 aaPredicted RBP13.02□□□□□ -0.33
LINC00552-201ENST00000625151 NIT2Q9NQR4 276 aa13.02□□□□□ -0.33
LINC00552-201ENST00000625151 HSPA12AO43301 675 aa13.01□□□□□ -0.33
LINC00552-201ENST00000625151 FBP1P09467 338 aa13.01□□□□□ -0.33
LINC00552-201ENST00000625151 SPINK2P20155 84 aa13.01□□□□□ -0.33
LINC00552-201ENST00000625151 VDAC1P21796 283 aa13.01□□□□□ -0.33
LINC00552-201ENST00000625151 ARF1P84077 181 aaKnown RBP13.01□□□□□ -0.33
LINC00552-201ENST00000625151 ZNF154Q13106 437 aa13.01□□□□□ -0.33
LINC00552-201ENST00000625151 SRSF7Q16629 238 aaKnown RBP eCLIP13.01□□□□□ -0.33
LINC00552-201ENST00000625151 OR8G5Q8NG78 346 aa13.01□□□□□ -0.33
LINC00552-201ENST00000625151 NEK7Q8TDX7 302 aa13.01□□□□□ -0.33
LINC00552-201ENST00000625151 POM121Q96HA1 1249 aa13.01□□□□□ -0.33
LINC00552-201ENST00000625151 GSN-AS1Q9NRJ2 163 aa13.01□□□□□ -0.33
LINC00552-201ENST00000625151 KIAA1456Q9P272 454 aa13.01□□□□□ -0.33
LINC00552-201ENST00000625151 ZNF503-AS2A6NEH8 195 aa13.01□□□□□ -0.33
LINC00552-201ENST00000625151 ZNF727A8MUV8 499 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms