RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CXCR1P25024 350 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 S100PP25815 95 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 ADORA2BP29275 332 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 MIPP30301 263 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 EIF1P41567 113 aaKnown RBP2.58□□□□□ -2
BRCA1-229ENST00000621897 GZMMP51124 257 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 RND2P52198 227 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 MTPNP58546 118 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 C1QTNF8P60827 252 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 RAP1BP61224 184 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 SMAGPQ0VAQ4 97 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 CDK10Q15131 360 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 ACOT6Q3I5F7 207 aaPredicted RBP2.58□□□□□ -2
BRCA1-229ENST00000621897 CDNFQ49AH0 187 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 N4BP2L1Q5TBK1 243 aaPredicted RBP2.58□□□□□ -2
BRCA1-229ENST00000621897 TMEM215Q68D42 235 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 OR10K2Q6IF99 312 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 SPNS3Q6ZMD2 512 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 Q6ZN92 141 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 OAFQ86UD1 273 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 C17orf82Q86X59 251 aaPredicted RBP2.58□□□□□ -2
BRCA1-229ENST00000621897 ANGPTL5Q86XS5 388 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 LRRC18Q8N456 261 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 NPWQ8N729 165 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 CHST4Q8NCG5 386 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 OR8J3Q8NGG0 315 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 MCFD2Q8NI22 146 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 NEIL3Q8TAT5 605 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 CD200R1Q8TD46 325 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 ZFP90Q8TF47 636 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 BLNKQ8WV28 456 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 LRRC58Q96CX6 371 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 ANKRD36BP1Q96IX9 119 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 SLC35E1Q96K37 410 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 PGLYRP4Q96LB8 373 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 RDH12Q96NR8 316 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 SMIM14Q96QK8 99 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 ARHGDIGQ99819 225 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 FAAP24Q9BTP7 215 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 C20orf85Q9H1P6 137 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 CLMPQ9H6B4 373 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 RNF167Q9H6Y7 350 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 LRTM1Q9HBL6 345 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 WFDC1Q9HC57 220 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 SH2D2AQ9NP31 389 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 ENY2Q9NPA8 101 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 CYTL1Q9NRR1 136 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 IDI2-AS1Q9NZ38 188 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 OPTCQ9UBM4 332 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 ZNF223Q9UK11 482 aaPredicted RBP2.58□□□□□ -2
BRCA1-229ENST00000621897 DKKL1Q9UK85 242 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 ST3GAL6Q9Y274 331 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 V9GY05 133 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 RTL9Q8NET4 1388 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 PIK3C2GO75747 1445 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 UHRF1BP1Q6BDS2 1440 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 SETD5Q9C0A6 1442 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 MYH3P11055 1940 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 ZCCHC11Q5TAX3 1644 aaKnown RBP2.57□□□□□ -2
BRCA1-229ENST00000621897 TMEM131Q92545 1883 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 IGHV3OR16-9A0A0B4J2B5 98 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 TEX50A0A1B0GTY4 177 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 EXOC1LA0A1B0GW35 172 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 OR4C46A6NHA9 309 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 EVPLLA8MZ36 301 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 H7C1H1 209 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 J3QT63 122 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 MANBAO00462 879 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 TRAF3IP2O43734 574 aaPredicted RBP2.57□□□□□ -2
BRCA1-229ENST00000621897 ORC5O43913 435 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 RDH16O75452 317 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 SUPT7LO94864 414 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 MOSP00540 346 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 MMP7P09237 267 aaPredicted RBP2.57□□□□□ -2
BRCA1-229ENST00000621897 CD79AP11912 226 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 COX4I1P13073 169 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 VDAC1P21796 283 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 OMGP23515 440 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 SDC4P31431 198 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 CA5AP35218 305 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 CCR6P51684 374 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 RHOBP62745 196 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 EMX1Q04741 257 aaPredicted RBP2.57□□□□□ -2
BRCA1-229ENST00000621897 PMVKQ15126 192 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 QPRTQ15274 297 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 RSU1Q15404 277 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 SMIM21Q3B7S5 101 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 TMEM78Q5T7P6 136 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 CNIH2Q6PI25 160 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 XKRXQ6PP77 449 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 OPN5Q6U736 354 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 TMEM205Q6UW68 189 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 TCF24Q7RTU0 167 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 ZNF589Q86UQ0 364 aaPredicted RBP2.57□□□□□ -2
BRCA1-229ENST00000621897 EIF4E3Q8N5X7 224 aaKnown RBP2.57□□□□□ -2
BRCA1-229ENST00000621897 ZNF439Q8NDP4 499 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 OR4P4Q8NGL7 312 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 SPPL2BQ8TCT7 592 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 C1orf54Q8WWF1 131 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 CYGBQ8WWM9 190 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms