RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SLC25A26Q70HW3 274 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 FGFBP3Q8TAT2 258 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 WNT5BQ9H1J7 359 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 Q9N2K0 584 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 GFOD1Q9NXC2 390 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 TAAR3PQ9P1P4 343 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 ZNF816-ZNF321PA0A0X1KG74 233 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 SCTP09683 121 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 CD200P41217 278 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 OR2T2Q6IF00 324 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 MRPL14Q6P1L8 145 aaKnown RBP16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 FRZBQ92765 325 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 ALKBH3Q96Q83 286 aaPredicted RBP16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 TK1P04183 234 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 RAC1P63000 192 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 FOXO1Q12778 655 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 ZNF468Q5VIY5 522 aaPredicted RBP16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 CPT1CQ8TCG5 803 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM210BQ96KR6 192 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 SF3B5Q9BWJ5 86 aaKnown RBP16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 OR2H1Q9GZK4 316 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 CFAP54Q96N23 3096 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 WDR87Q6ZQQ6 2873 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 A0A1W2PQM1 296 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 TUSC2O75896 110 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 NAPSAO96009 420 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 EDN3P14138 238 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 RND2P52198 227 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 OR8G1Q15617 311 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 DNLZQ5SXM8 178 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 Q8NFD4 153 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 C14orf144Q96I85 54 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 RHOVQ96L33 236 aa16.8■□□□□ 0.28
PDLIM3-212ENST00000620787 OR5H1A6NKK0 313 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 PTBP3O95758 552 aaKnown RBP16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 SRSF7Q16629 238 aaKnown RBP eCLIP16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 THNSL2Q86YJ6 484 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 C1orf87Q8N0U7 546 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 ZNF295-AS1Q8N0V1 137 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 OR5D13Q8NGL4 314 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 POM121Q96HA1 1249 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 CCL28Q9NRJ3 127 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 GNG13Q9P2W3 67 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 CA14Q9ULX7 337 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 SDK2Q58EX2 2172 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 IGHV5-10-1A0A0J9YXX1 117 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 RAB11AP62491 216 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 GAMTQ14353 236 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 GUSBP11Q6P575 273 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 TECTBQ96PL2 329 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 WNT16Q9UBV4 365 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 NCKAP5O14513 1909 aa16.79■□□□□ 0.28
PDLIM3-212ENST00000620787 TNRC6BQ9UPQ9 1833 aaKnown RBP16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A10PA6NDY2 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A18PA6NE21 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A16PA6NEW6 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A20PA6NIJ5 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A8PA6NJQ4 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A7PA6NKC0 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A22PA8MWA6 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A12PA8MX19 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A5PA8MXJ8 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A23PA8MXZ1 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 PHOX2AO14813 284 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A15PP0C7V4 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A13PP0C7W8 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A14PP0C7W9 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A24PP0C7X0 464 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 BCL3P20749 454 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 ZFP36L1Q07352 338 aaKnown RBP16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 SH2D2AQ9NP31 389 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 TMEM242Q9NWH2 141 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 CISD1Q9NZ45 108 aaKnown RBP16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 LOC102723996A0A087X1L8 192 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 IGKV1-6A0A0C4DH72 117 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 A0A0G2JRQ6 117 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 A0A1B0GU03 582 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 DFFBO76075 338 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 SRFP11831 508 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 FABP4P15090 132 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 CCL7P80098 99 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 H1FOOQ8IZA3 346 aaPredicted RBP16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 M1APQ8TC57 530 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 IL22RA2Q969J5 263 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 HS3ST6Q96QI5 342 aa16.78■□□□□ 0.28
PDLIM3-212ENST00000620787 PRUNE2Q8WUY3 3088 aa16.77■□□□□ 0.28
PDLIM3-212ENST00000620787 H0Y980 276 aa16.77■□□□□ 0.28
PDLIM3-212ENST00000620787 RAC3P60763 192 aa16.77■□□□□ 0.28
PDLIM3-212ENST00000620787 RNPS1Q15287 305 aaKnown RBP16.77■□□□□ 0.28
PDLIM3-212ENST00000620787 STX12Q86Y82 276 aa16.77■□□□□ 0.28
PDLIM3-212ENST00000620787 S100PBPQ96BU1 408 aa16.77■□□□□ 0.28
PDLIM3-212ENST00000620787 RCC1LQ96I51 464 aaKnown RBP16.77■□□□□ 0.28
PDLIM3-212ENST00000620787 CCDC74BQ96LY2 380 aa16.77■□□□□ 0.28
PDLIM3-212ENST00000620787 FOXB1Q99853 325 aa16.77■□□□□ 0.28
PDLIM3-212ENST00000620787 ZNF716A6NP11 495 aa16.77■□□□□ 0.27
PDLIM3-212ENST00000620787 H3BP45 60 aa16.77■□□□□ 0.27
PDLIM3-212ENST00000620787 CYB5R3P00387 301 aaPredicted RBP16.77■□□□□ 0.27
PDLIM3-212ENST00000620787 BCL2P10415 239 aa16.77■□□□□ 0.27
PDLIM3-212ENST00000620787 RPS18P62269 152 aaKnown RBP16.77■□□□□ 0.27
PDLIM3-212ENST00000620787 PNRC1Q12796 327 aaPredicted RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms