RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 ACAA2P42765 397 aaKnown RBP15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 EWSR1Q01844 656 aaKnown RBP eCLIP15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 C21orf62-AS1Q17RA5 79 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 SPINK9Q5DT21 86 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 C5orf17Q8NAS9 161 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 OR1B1Q8NGR6 318 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 ISOC2Q96AB3 205 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 DOCK1Q14185 1865 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 RPL36A-HNRNPH2H7BZ11 118 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 CXorf1O96002 111 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 CXCL3P19876 107 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 FOXC1Q12948 553 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 SLC35E3Q7Z769 313 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 STARD4Q96DR4 205 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 CYR61O00622 381 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 CHST1O43916 411 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 LYZL6O75951 148 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 SMAGPQ0VAQ4 97 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 SFTPA2Q8IWL1 248 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 SFTPA1Q8IWL2 248 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 ZNF784Q8NCA9 323 aaPredicted RBP15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 ELF5Q9UKW6 265 aaPredicted RBP15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 FUT9Q9Y231 359 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 CCL27Q9Y4X3 112 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 LOC105371267A0A1B0GV96 52 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 IGF2P01344 180 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 APCSP02743 223 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 FAM209BQ5JX69 171 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 TMEM92Q6UXU6 159 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 FER1L6Q2WGJ9 1857 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 CNTRLQ7Z7A1 2325 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 CTXND1A0A1B0GTU2 59 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 ISLRO14498 428 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 ZP4Q12836 540 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 ZNF788Q6ZQV5 615 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 BPIFA4PQ86YQ2 179 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 GPX7Q96SL4 187 aaPredicted RBP15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 DOK5Q9P104 306 aa15.3■□□□□ 0.04
HMGXB3-206ENST00000613459 HOGA1Q86XE5 327 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 IGHV3-43A0A0B4J1X8 118 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 SMPD2O60906 423 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 MPZL1O95297 269 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 NGFRP08138 427 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 IGHV3-43DP0DP04 118 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 TUSC1Q2TAM9 212 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 DHRS13Q6UX07 377 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 TCFL5Q9UL49 500 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 IFI6P09912 130 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 ZXDAP98168 799 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 NAAAQ02083 359 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 UBALD1Q8TB05 177 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 Q8WTZ3 238 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 WASHC3Q9Y3C0 194 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 SCN9AQ15858 1988 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 SRSF10O75494 262 aaKnown RBP15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 ORM2P19652 201 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 C1orf210Q8IVY1 113 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 GPR35Q9HC97 309 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 TMEM38BQ9NVV0 291 aa15.29■□□□□ 0.04
HMGXB3-206ENST00000613459 FFAR1O14842 300 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 PITX3O75364 302 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 COX7A1P24310 79 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 CD226Q15762 336 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 GAPTQ8N292 157 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 LPAR5Q9H1C0 372 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 ZNF552Q9H707 407 aaPredicted RBP15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 CORTO00230 105 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 SOCS1O15524 211 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 ASB5Q8WWX0 329 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 NAGKQ9UJ70 344 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 GNG7O60262 68 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 PSG5Q15238 335 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 SMIM12Q96EX1 92 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 TXNDC17Q9BRA2 123 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 HIST1H1EP10412 219 aaKnown RBP15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 YBX1P67809 324 aaKnown RBP15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 PAFAH1B2P68402 229 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 SCGB1D4Q6XE38 83 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 OVCH2Q7RTZ1 564 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 SRD5A3Q9H8P0 318 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 FAM60AQ9NP50 221 aa15.28■□□□□ 0.04
HMGXB3-206ENST00000613459 PLA2G10O15496 165 aa15.27■□□□□ 0.04
HMGXB3-206ENST00000613459 PNLIPP16233 465 aa15.27■□□□□ 0.04
HMGXB3-206ENST00000613459 UBE2V2Q15819 145 aa15.27■□□□□ 0.04
HMGXB3-206ENST00000613459 DGAT2L7PQ6IED9 249 aa15.27■□□□□ 0.04
HMGXB3-206ENST00000613459 RAB33BQ9H082 229 aa15.27■□□□□ 0.04
HMGXB3-206ENST00000613459 TMEM265A0A087WTH1 108 aa15.27■□□□□ 0.04
HMGXB3-206ENST00000613459 GEMIN2O14893 280 aaKnown RBP15.27■□□□□ 0.04
HMGXB3-206ENST00000613459 FAM3BP58499 235 aaPredicted RBP15.27■□□□□ 0.04
HMGXB3-206ENST00000613459 C10orf113Q5VZT2 155 aa15.27■□□□□ 0.04
HMGXB3-206ENST00000613459 LINC00518Q8N0U6 118 aa15.27■□□□□ 0.04
HMGXB3-206ENST00000613459 PLPPR2Q96GM1 343 aa15.27■□□□□ 0.04
HMGXB3-206ENST00000613459 RASL11BQ9BPW5 248 aa15.27■□□□□ 0.04
HMGXB3-206ENST00000613459 TNFSF18Q9UNG2 199 aa15.27■□□□□ 0.04
HMGXB3-206ENST00000613459 CD160O95971 181 aa15.27■□□□□ 0.03
HMGXB3-206ENST00000613459 FSTP19883 344 aa15.27■□□□□ 0.03
HMGXB3-206ENST00000613459 B2MP61769 119 aa15.27■□□□□ 0.03
HMGXB3-206ENST00000613459 TRIP6Q15654 476 aaKnown RBP15.27■□□□□ 0.03
HMGXB3-206ENST00000613459 ZNF79Q15937 498 aa15.27■□□□□ 0.03
HMGXB3-206ENST00000613459 OR4P4Q8NGL7 312 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms