RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ZNF431Q8TF32 576 aaPredicted RBP7.5□□□□□ -1.21
CCDC47-207ENST00000612558 CAPSLQ8WWF8 208 aa7.5□□□□□ -1.21
CCDC47-207ENST00000612558 FYTTD1Q96QD9 318 aaKnown RBP7.5□□□□□ -1.21
CCDC47-207ENST00000612558 DHRS9Q9BPW9 319 aa7.5□□□□□ -1.21
CCDC47-207ENST00000612558 ZNF2Q9BSG1 426 aaPredicted RBP7.5□□□□□ -1.21
CCDC47-207ENST00000612558 SEBOXQ9HB31 216 aaPredicted RBP7.5□□□□□ -1.21
CCDC47-207ENST00000612558 DECR2Q9NUI1 292 aa7.5□□□□□ -1.21
CCDC47-207ENST00000612558 OR14J1Q9UGF5 321 aa7.5□□□□□ -1.21
CCDC47-207ENST00000612558 HCFC1P51610 2035 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 USP24Q9UPU5 2620 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 OR5H14A6NHG9 310 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 RFPL4AA6NLU0 287 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 RFPL4AL1F8VTS6 287 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 M0R233 179 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 FABP7O15540 132 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 LHBP01229 141 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 CD55P08174 381 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 CTXN2P0C2S0 81 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 TNFRSF1AP19438 455 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 APOBEC3AP31941 199 aaPredicted RBP7.49□□□□□ -1.21
CCDC47-207ENST00000612558 UQCRFS1P47985 274 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 KCNJ3P48549 501 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 UBE2MP61081 183 aaKnown RBP7.49□□□□□ -1.21
CCDC47-207ENST00000612558 TLE1Q04724 770 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 ZFP69Q49AA0 526 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 SPRNQ5BIV9 151 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 ZNF497Q6ZNH5 498 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 C17orf107Q6ZR85 190 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 MUC20Q8N307 709 aaPredicted RBP7.49□□□□□ -1.21
CCDC47-207ENST00000612558 SPICQ8N5J4 248 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 GCSAMQ8N6F7 178 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 TMEM185AQ8NFB2 350 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 Q8TCH9 128 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 GCM1Q9NP62 436 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 RNF7Q9UBF6 113 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 ZNF222Q9UK12 451 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 MGAT4AQ9UM21 535 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 RNF115Q9Y4L5 304 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 WIPI2Q9Y4P8 454 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 NPTNQ9Y639 398 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 KALRNO60229 2985 aa7.49□□□□□ -1.21
CCDC47-207ENST00000612558 RELNP78509 3460 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 MEIKINA0A087WXM9 373 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 B9A039 149 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 PSPNO60542 156 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 CLDN14O95500 239 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 HLA-AP01891 365 aaKnown RBP7.48□□□□□ -1.21
CCDC47-207ENST00000612558 TK1P04183 234 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 SCTP09683 121 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 ANXA3P12429 323 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 AKR1C4P17516 323 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 EGR1P18146 543 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 CXCL3P19876 107 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 ZBTB25P24278 435 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 FCGR2CP31995 323 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 PRDX2P32119 198 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 GLP1RP43220 463 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 CEBPDP49716 269 aaPredicted RBP7.48□□□□□ -1.21
CCDC47-207ENST00000612558 DHRS2Q13268 280 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 TESK1Q15569 626 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 EFNB3Q15768 340 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 TMEM128Q5BJH2 165 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 IGSF11Q5DX21 431 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 FAM209AQ5JX71 171 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 MOB1BQ7L9L4 216 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 LYG2Q86SG7 212 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 C12orf45Q8N5I9 185 aaPredicted RBP7.48□□□□□ -1.21
CCDC47-207ENST00000612558 ADAD2Q8NCV1 583 aaKnown RBP7.48□□□□□ -1.21
CCDC47-207ENST00000612558 OR11L1Q8NGX0 322 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 PLPPR1Q8TBJ4 325 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 DMRTB1Q96MA1 342 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 RTBDNQ9BSG5 229 aaPredicted RBP7.48□□□□□ -1.21
CCDC47-207ENST00000612558 EGLN1Q9GZT9 426 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 LIME1Q9H400 295 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 C5orf66Q9H5L9 145 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 CISD1Q9NZ45 108 aaKnown RBP7.48□□□□□ -1.21
CCDC47-207ENST00000612558 DNAJB11Q9UBS4 358 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 IGSF10Q6WRI0 2623 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 DYSFO75923 2080 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 KIAA2026Q5HYC2 2103 aa7.48□□□□□ -1.21
CCDC47-207ENST00000612558 ARFGEF3Q5TH69 2177 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 C9orf170A2RU37 121 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.47□□□□□ -1.21
CCDC47-207ENST00000612558 ZG16O60844 167 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 PLAUP00749 431 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 PSG2P11465 335 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 IRF2P14316 349 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 PGAM2P15259 253 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 UCP3P55916 312 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 IL13RA1P78552 427 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 CCL8P80075 99 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 HOXA4Q00056 320 aaPredicted RBP7.47□□□□□ -1.21
CCDC47-207ENST00000612558 DHODHQ02127 395 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 COL10A1Q03692 680 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 PPP1R1AQ13522 171 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 ATXN7L3Q14CW9 347 aaPredicted RBP7.47□□□□□ -1.21
CCDC47-207ENST00000612558 SLC35E4Q6ICL7 350 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 BOLLQ8N9W6 283 aaKnown RBP7.47□□□□□ -1.21
CCDC47-207ENST00000612558 OR2AK2Q8NG84 335 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 OR4A4PQ8NGN8 299 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms